Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0038 ATGGCGTCTTTGCAGCCTGACTTAGATTCTATTTATTCCGATTCGTTGCCGCGACCCAGTCTCAAAGAGCGCACCGATTTCGGGTCCGATTCTAACCATCACAATTCTCTCCACGCCGTTCGATGGAGATCCGATACGGAGCGTCGGATCTACTCCTCCAAGCTCGTCGATGCTCTGCGCCACGTCCTCCGTCGCGGTACTTCTCTCCCGGCCAAACCTAGCGGCGGTCGTGAAATTCTTGAGACAGCAGATAGAGTTCTAGCCGCGGCGGCCAAGGGCAGAACTCGATGGAGTCGAGCGATCCTGGCTTCTCCGCTCGGCCGTTGGAGATTGCAGAGGCAACACAAGAAGGTGAAGAAGATGACAAGAGGATTGAAGAAACCGGAGATTAGGAAAGAGAGGAGGAGGTTACCGGCTCTGCAGAAGAAAGCTCGCGTTCTCGGCAGATTAGTTCCTGGTTGCCGTAAGGTCTCCTTTCCGAATCTTCTGGAAGAAGCCACTGACTATATATCGGCCTTGGAGATGCAAGTTCGAGCCATGACGGCACTCACCGAATTGCTCGCCGGTGGTGGCACACCTGCCGATTGA 588 0.5459 MASLQPDLDSIYSDSLPRPSLKERTDFGSDSNHHNSLHAVRWRSDTERRIYSSKLVDALRHVLRRGTSLPAKPSGGREILETADRVLAAAAKGRTRWSRAILASPLGRWRLQRQHKKVKKMTRGLKKPEIRKERRRLPALQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALTELLAGGGTPAD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0038 195 CDD bHLH_AtIBH1_like 131 184 IPR044549 GO:0006355
Lele06g0038 195 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Lele06g0038 195 Gene3D - 112 189 IPR036638 GO:0046983
Lele06g0038 195 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 187 IPR044660 GO:0006355
Lele06g0038 195 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 188 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0038 Lele-ChrLele06 284710 285297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0038 1 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 43.684 2.81e-40 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0227 05 1270686 1271294 Lele06g0038 06 284710 285297 ECH
Lele06g0038 06 284710 285297 Lele06g0038 06 284710 285297 ECH
Lele06g0038 06 284710 285297 Lele07g0233 07 1290358 1290963 hybridization
Lele06g0038 06 284710 285297 Lele08g0038 08 260834 264558 hybridization