Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0033 ATGCCCACCGTGCCGGGTCTCGTTGGTCCTGCTCTTCGACACCCCTTCTTTCTACAAAAGACCACTGCCGTGCATTGCTTCTCTTCTGAACAGAGAAAAACAGAGACACAGAACGACAAAAAAATGGGCTCCCGGGGAACTGAAACTGCAAAGAAAGCAATGTGGCTATATCCAAAAGTTTTGGGGTTCAAGCCTTCTGAAAGATGGGGGCACTCTGCTTGCTTTTCCGTGGGCCTTGTAAATGCTCACATTTACGTTCTCCACTGTTTCTGCTCACTCTTCACTCCGTTCACGTTTGTCGACCTAACAACCACGCACATGGAAATGTCGTACTTTCGAATTCGTTCCTGGCAATTTGAGCATTTCAATGTTTGTAACTTAGCTGTCTGTTGTCCCCAGATGAACAGCGATGTTCTGACTTTGGACATTAGCAACATGACATGGAGTAAACTTGTAACAACCGGGGAAGGGCCTGGTCCTAGAGATAGCCACAGCGCGGTTCTTGTAGGCCATAAAATGATAGTGTTTGGTGGTACAAATGGCTTCAAGAAAGTTAATGACATTCATCTTCGAACCATGCACTGGACTTCTCCAGAGGTAAAAGGTGACTTGCCTGTACCTAGGGACAGTCACACTACTCTCGCAATTGGCAACAAGCTTTTTGTTTATGGAGGAGACTGTGGTGATCAGTATCACGGTAATGTCAATATGCTGGATCTGGATGCTATGACTTGGTCAAAGGTGTATATTATTGGAGGGGTTGGAGACAAACGTTACTATAATGATGTTTGGGTATTTGATATCTGCGCTTGTTCGTGGACTCGGCTTGAAATACGAGGTCAGCAACCTCAAGGGCGGTTTTCTCACACAGCTGTTGTCGCTGACATGGACATTGTCATGTGTGGGGAAGATGAACGTCCTCTGGATGAATTGTTGGTGTTGCAGCTGGGAGCAGAGCACCCAAATGGACGTTATAACATATCTATGGGCAAAGTTTTTGGAAGCTATTGGAAGAAGACCTGCTCAATAGGAGCAGACAGCAACGCGAAGGCAATGCTCTTGGGGAATAATGTGGACGCTTTAGGAAAGGGAGCTTATGAATTCGCCGCAGGAAAAAAGCAGCCTTCGCCCTTTGAATCCGATACTTCCCAACAGAAGAAGAGGAGAATTGCTGCTTCAAAGGTGTGGGATGTTGATTTAGAACAAGAAGAGCATTCTCTTTCCTTGTCCCAGCATTCATCTCCGACTCAATCCGATCAAGAACATAACCCTGCCCAAAAACTCACTGCTTCCACCACGGACTCTCAGCGATTCCTTATGCTCAAACAGTTAAACCAAACGCCAAACAATTCCCAACATGACCCCGCCTCCATTAACCCAAAAGTACCGAAGAATTCTAACCAGAGGAATCCCCAGGGCTTTCATTATCTTCTAAAACAGCATCACCATGTTTATGATGCAGAGCACATGCCCATGGTTCGAGGGCCAATCCAACACCTGATCGGTGCTGAAGTCCGAGGGAGAGTGGACGGGGCCTTCGACTCAGGGAACGGGAACAGTGTCAAGAGGGGGGAGCGTGGAAGCGAGCTCGAATCAAAAGTGGGAGAATGTGAGGGGTTGGCAGGAGGGAAGTGGTTGTCAGGCGACTCAACCATTCCCAATGATGAGAGCCAAAGAGGAGAAAATGAGGAGCGATCTCAATGGCTTGGTTCTGACACTCGGAGGACCTGCCACTGCCCACCATTAATGCCTGCAAGTATATATCGATCTAGGAGCGCGATAACAAGTTTATGA 1794 0.4744 MPTVPGLVGPALRHPFFLQKTTAVHCFSSEQRKTETQNDKKMGSRGTETAKKAMWLYPKVLGFKPSERWGHSACFSVGLVNAHIYVLHCFCSLFTPFTFVDLTTTHMEMSYFRIRSWQFEHFNVCNLAVCCPQMNSDVLTLDISNMTWSKLVTTGEGPGPRDSHSAVLVGHKMIVFGGTNGFKKVNDIHLRTMHWTSPEVKGDLPVPRDSHTTLAIGNKLFVYGGDCGDQYHGNVNMLDLDAMTWSKVYIIGGVGDKRYYNDVWVFDICACSWTRLEIRGQQPQGRFSHTAVVADMDIVMCGEDERPLDELLVLQLGAEHPNGRYNISMGKVFGSYWKKTCSIGADSNAKAMLLGNNVDALGKGAYEFAAGKKQPSPFESDTSQQKKRRIAASKVWDVDLEQEEHSLSLSQHSSPTQSDQEHNPAQKLTASTTDSQRFLMLKQLNQTPNNSQHDPASINPKVPKNSNQRNPQGFHYLLKQHHHVYDAEHMPMVRGPIQHLIGAEVRGRVDGAFDSGNGNSVKRGERGSELESKVGECEGLAGGKWLSGDSTIPNDESQRGENEERSQWLGSDTRRTCHCPPLMPASIYRSRSAITSL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0033 597 SUPERFAMILY Kelch motif 135 302 IPR015915 GO:0005515
Lele06g0033 597 MobiDBLite consensus disorder prediction 446 472 - -
Lele06g0033 597 Gene3D - 23 247 IPR015915 GO:0005515
Lele06g0033 597 MobiDBLite consensus disorder prediction 407 429 - -
Lele06g0033 597 Pfam Galactose oxidase, central domain 135 168 - -
Lele06g0033 597 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 190 247 - -
Lele06g0033 597 MobiDBLite consensus disorder prediction 556 571 - -
Lele06g0033 597 Pfam Galactose oxidase, central domain 247 283 - -
Lele06g0033 597 MobiDBLite consensus disorder prediction 403 429 - -
Lele06g0033 597 MobiDBLite consensus disorder prediction 542 573 - -
Lele06g0033 597 Gene3D - 248 345 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0033 Lele-ChrLele06 220948 226020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0033 32 326 Acyl Lipid Metabolism Gene Families AT3G05420 22.449 1.03e-13 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0033 06 220948 226020 Lele06g0033 06 220948 226020 ECH
Lele06g0033 06 220948 226020 Lele07g0228 07 1253467 1267343 hybridization