LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele06g0020	ATGGAGATCGAGAAAAGACGTTCCAAGGGAAGCTTCCTCAGCTTGTTTGATTGCAATGGAGTATCTCGAAAGAAGCTGTTCCATGCCAGTTCTAACTTGCCTGTCGAATTGAAGCGAGCCGAGGAAAATGTGGGGAACATTCCAGAATCACAGTTGAATACGACAAAGGTAGATGAGAATGGAATAAATCCAAGCAGTACAGCATCTTGCGATTTCAACTGTGAGCTATCAGCTAGAAGTGATATGAGATGTGAAACCAAGGTGCCATGCTTAGTAGCGAGACTAATGGGTTTGGATTCATTGCCAATTTCAACGGTCAATGAACTCTCTTTTACTGCATCGCGTTCCTCCAACTCTCTCGTATCTTCTCACTGTCATGAGGATCCTGTTTCCCCCATGAAATCAAGGGCACATAAGGCTGAAAACAGGACAATTGAAGTAAGACGGCCAAATAATGCAGCTATAAGAGTTCTTGATTTGAAGCAAAAGTCCGAAGCCTCACATCATGCATCCATCCATGAAAAGATTATGGATACAAATACTGTTGAGGGCTCAAGATACTCAGAAAACATTGTTTCTCACCGTAATGGGAGTAGAGGAAACTCAACCTTACTTGCAATACAAGCTAAGGCCCATTTTCAATGCAGAGGTACATTCACTTCAAATGGTAACAGGGAACATAAGCAGAAAGAAAAGAATGAGATTGCATCCGACCAGTTCTTCAGGACCCAGAAACCAATCTTACAGCAGGCTATGAGGCAGAGAACTTGTACAAGCCGGAATAGACATTACAACGAGCTTGGGCAGAATATGAAAATGCAGAATAGTGCTATCATTAAAGTCATGTCAACTTCAATAGTAGAATCCAACAAGCCTACCGTACGAAGGTCCACTAGTGGAGCAAGGAAGGTGACAAACAAGAATTACGTAATTGGCAATGTTAGACCCAACAGTTCTGGCAGAAAAGCAACTGGTGCCAGAGAGGAGTTTTCCCCGATCAATACGAAGAGTAATTCCATGAGGAAAAGGTATCCCAAAAGGGATGTTCTTTCTGTTAATGCTGTTAATAGTTACGAAGTTAAGTCCATAAAATGCAATATAACAACTGACCGGAGTATGAATCAGGATGCATTAAACAAGAAAGCTGGCAAGGATGCTATTTCCTTTACGTTTACATCGCCTTTGAAGAAAGAGTCACAACGTTCGACTCATACAAACAGCGTTGATGTCAATGCTCCTGGTTTACATATGACAGATGATGATGCTTCAAGTGACCTGCTCAATGGAAAGGCGCAAGATTTGGCAGCTAGAATCAACTCACCGGAATGTACTCTGGCTACTAGGGTGTCTTCTGCTGTTTTACTACCCAGTGAGCTAAGCATCAAATCTGCAGAAGGAGACGGAAGTTTTCACTCTGATCCGCCTAGTAGTGAACTGCAGGGCATGCATAACCATGGATGTTCTTCAAGCGTTGATCTGATGCTTAACATGAATCAGCAGCTGCAGGGATCCAAAGCAATACGACAACATAGTAGGGACAACAACATTGAAACTGAGTACTGTCAAGGTTTAAACTCTGCTTTCGTTAGTCAAGCTGCCGAACAAGTATGTGAGCTTTCATATTCAGGAGATTATAATAGGTCGAGGAACTTGAAGCTTGAATATGTAAAGGATATGGTTAGCAGTAAAATGTTAATGGAAGAAATTTTTGCACGGGATCAAACAATCAGAAACGAACAGGTGATAAAGACAAATGTGTTTGATATGTTGGAGAAATGGAGCAGTGGAACTGAAAACGATGATGGAGAAGAGCACTTGAAAGTGGAGAGGAATCTTTTGTTTGACTTTGTGAGCGAGTTCCTGGAATTCAGAAGAAGCAAGAGGTACAAGGGAAGGGCCCTGCTGGAGAGTCAGGTTTGGTGGGAAGAAGACTTGTGCAGAGAAATCCAGCGATTTAAAAGCATGCAAGAGAAAGAGATCATGGTGGATGAGCTGGTGAACATGGACATGAGCTCTCCAAATGCCACGTGGCTCCATTTTCAGACTGAACCCTTGCAGCAGATTTTACTTGCAGAGATTGAGTGGGACATTTCAACTTCTCTCATCAATGATTTGCTTCTTGATTTGTTGCCTCATTAG	2139	0.4231	MEIEKRRSKGSFLSLFDCNGVSRKKLFHASSNLPVELKRAEENVGNIPESQLNTTKVDENGINPSSTASCDFNCELSARSDMRCETKVPCLVARLMGLDSLPISTVNELSFTASRSSNSLVSSHCHEDPVSPMKSRAHKAENRTIEVRRPNNAAIRVLDLKQKSEASHHASIHEKIMDTNTVEGSRYSENIVSHRNGSRGNSTLLAIQAKAHFQCRGTFTSNGNREHKQKEKNEIASDQFFRTQKPILQQAMRQRTCTSRNRHYNELGQNMKMQNSAIIKVMSTSIVESNKPTVRRSTSGARKVTNKNYVIGNVRPNSSGRKATGAREEFSPINTKSNSMRKRYPKRDVLSVNAVNSYEVKSIKCNITTDRSMNQDALNKKAGKDAISFTFTSPLKKESQRSTHTNSVDVNAPGLHMTDDDASSDLLNGKAQDLAARINSPECTLATRVSSAVLLPSELSIKSAEGDGSFHSDPPSSELQGMHNHGCSSSVDLMLNMNQQLQGSKAIRQHSRDNNIETEYCQGLNSAFVSQAAEQVCELSYSGDYNRSRNLKLEYVKDMVSSKMLMEEIFARDQTIRNEQVIKTNVFDMLEKWSSGTENDDGEEHLKVERNLLFDFVSEFLEFRRSKRYKGRALLESQVWWEEDLCREIQRFKSMQEKEIMVDELVNMDMSSPNATWLHFQTEPLQQILLAEIEWDISTSLINDLLLDLLPH	712

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele06g0020	712	MobiDBLite	consensus disorder prediction	396	416	-	-
	Lele06g0020	712	Pfam	DUF761-associated sequence motif	83	105	IPR032795	-
	Lele06g0020	712	MobiDBLite	consensus disorder prediction	311	341	-	-
	Lele06g0020	712	MobiDBLite	consensus disorder prediction	396	412	-	-
	Lele06g0020	712	Pfam	Domain of unknown function (DUF4378)	553	703	IPR025486	-
	Lele06g0020	712	PANTHER	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED	170	708	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele06g0020	Lele-ChrLele06	145518	148018	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele06g0020	363	710	TRM (TON1 Recruiting Motif) Superfamily	AT5G26910	27.295	1.93e-24	107