Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0011 ATGGGGCATTTTTCGTCCATGTTCAATGGATTGGCAAGGTCGTTCTCAATAAAGAAAGCCAAGAGTTCTGGGAAATGTGCCGGAAGAGAAGCCGCCGAAGCAATGGCCAAAGAAGCTAAGAAAAATGACCAGATTCTCCGCACCTCTGGCACCGTTCATGTCCAGGGCTCCAACAACTTCGCCTCAATTTTTTCCAAGAAAGGCCAGAAAGGAGTCAACCAGGATTGTTGCATAGTTTGGGAGGAATTTGGATGTCAAGAGGACATGATGTTCTGTGGGATATTTGACGGCCACGGGCCATGGGGTCACTTCGTGGCAAAGAGAGTAAGAGAGACCATGGCTCCATCTCTCTTGTGTAACTGGCAGGAGACACTTGGCCAGACCTTGCTAGATCCTGATTTCGACTTAGAGGATGAGAAAAAGCGACACCCTTTCCATATATGGAAGCACTCCTACTTGAAGACTTGTGCCGCCATTGATCACGAGCTAGGGCTCTCTCGCAAAATCGATTCTTTCTACAGCGGAACCACTGCTCTCTCCATTGTTCGACAGGGTGAGCTAATCGTTGTGGCAAATGTGGGTGACTCTCGGGCTGTATTAGCCACAACTTCAGACGATCATAGCTTAGTGCCAGTACAGCTGACTGTTGATTTCAAGCCCAATCTGCCCGAGGAGGCAGAGCGTATAATTCAGTGTCAAGGACGAGTCTTCTGCTTAGAAGACGAACCGGGAGTTCACAGAGTGTGGCTGCCAGACGGAGAGTCGCCAGGACTGGCCATGTCTAGAGCCTTCGGAGACTACTGCGTGAAGGAGTATGGAGTTATTTCTGCTCCTGAGGTAACACACAGGACCATCACCAGCAGAGACCAATTCGTTGTGCTGGCAACAGACGGGGTGTGGGATGTGATATCGAATGAAGAAGCGGTGCGAATAGTGGCTTCAACAGAGGACAGAGGGAAGTCGGCAAGAAGCTTAGTGGAGTGTGCGGTGGCGGCTTGGAAGCGCAAGAGACGGGGCTTTGCCATGGATGACATTTCTGCAATTTGTGTATTCTTGCATCCTCCTCCTCCTCCATCTCTCCCCAAAGAGGATTGA 1095 0.5032 MGHFSSMFNGLARSFSIKKAKSSGKCAGREAAEAMAKEAKKNDQILRTSGTVHVQGSNNFASIFSKKGQKGVNQDCCIVWEEFGCQEDMMFCGIFDGHGPWGHFVAKRVRETMAPSLLCNWQETLGQTLLDPDFDLEDEKKRHPFHIWKHSYLKTCAAIDHELGLSRKIDSFYSGTTALSIVRQGELIVVANVGDSRAVLATTSDDHSLVPVQLTVDFKPNLPEEAERIIQCQGRVFCLEDEPGVHRVWLPDGESPGLAMSRAFGDYCVKEYGVISAPEVTHRTITSRDQFVVLATDGVWDVISNEEAVRIVASTEDRGKSARSLVECAVAAWKRKRRGFAMDDISAICVFLHPPPPPSLPKED 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0011 364 FunFam Probable protein phosphatase 2C 34 51 354 - -
Lele06g0011 364 CDD PP2Cc 59 352 IPR001932 -
Lele06g0011 364 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Lele06g0011 364 SUPERFAMILY PP2C-like 51 355 IPR036457 -
Lele06g0011 364 SMART PP2C_4 54 350 IPR001932 -
Lele06g0011 364 Pfam Protein phosphatase 2C 81 324 IPR001932 -
Lele06g0011 364 PANTHER PROTEIN PHOSPHATASE 42 350 - -
Lele06g0011 364 Gene3D - 27 353 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0011 Lele-ChrLele06 66882 68312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0011 1 353 PP2C-type Phosphatase Gene Family AT3G05640 69.382 0.0 520
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2250 13 28677737 28680628 Lele06g0011 06 66882 68312 CCT
Lele14g2184 14 27029900 27033086 Lele06g0011 06 66882 68312 CCT
Lele15g0162 15 999038 1000200 Lele06g0011 06 66882 68312 CCT
Lele16g0171 16 1017505 1018761 Lele06g0011 06 66882 68312 CCT
Lele06g0011 06 66882 68312 Lele06g0011 06 66882 68312 ECH
Lele06g0011 06 66882 68312 Lele07g0206 07 1104465 1105912 hybridization
Lele06g0011 06 66882 68312 Lele08g0012 08 62693 64118 hybridization