Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0010 ATGTCAACGGAGCGGCTGATCGAACCTTCCGATGCAATGTCCGAAGCATTGCCGACTTCTCAGTCGTTTAGGCAATGCGGCGAACCTGGTTGGATATTTGAAGAATTGCCCAAGGCCACCATTGTTTCCGTTTCCAGACCAGACACTGGAGATATTAGTCCAATCCTTCTGTCTTACACCATAGAGTTGGAGTACAAACAGTTCAAATGGCGCTTAATGAAGAAAGCCTCACAAGTTCTCTACTTACATTTCGCTTTAAAGAAACGCGCATTAATTGAAGAATTTCACGACAAACAGGAGCAGGTAAAAGAATGGCTGCAAAGCTTAGGAATATTTGATCAAATAGCGATGGTGCAAGATGCTGAAGAACCTGATGATGGGGCTGTGCCTTTACATCATGAAGACAGTATCAGGAACAGATATGTACCATCCGCGGCAGCCCTACCAATCATTCGTCCAACACTAGGAGGGCAGCAGTCAGTTGCAGATAAAGCAAAAGTAGCAATGCAGGGTTACTTGAATCATTTCCTTGGACACTTGGATATTGTCAATTCTCGAGAGGTCTGCAAGTTCTTGGAGGTCTCTAGGTTATCCTTTTTACACGATTATGGATCAAAAATGAAAGAGGGCTATGTAATGGTGAGGCGCTTATCAAATATCTCTAGGGATTCAGATGTAACATGCTTTCCATGCGAATGGCTGGGTTTCTGTAATAACAACTGGTCCAAGGTGTGGGCTGTCCTGAAACCTGGCTTTTTAGCCTTGCTGGATGATCCTTTCAGCAACAAACCGGTAGATATAATTGTTTTTGATATCCTCCCTTCATCAAGTGAAGATAAGGGTTCCTCGATATATTTGGCTGATCATGTCATTGAACGCAATCCCTTAAGATACACATTTAACGTAACTAGCGGAAATCGGAGCATAAGTTTGAGAACTAGCAGCAGTGCCAAAGTTAAAGATTGGGTTACTAAAATTAACGAGGCTGGTCTTAGACCTCGAGAGGGTTGGTGTCGGCCTCATCGCTTTGGTTCATTTGCTCCCATAAGAGGTTTGACTGAAGATGGAAGCCAAGCCCAGTGGATTATAGATGGGAAGGCAGCATTCGAAGCAATTGCTTCCTCAATTCAGGAAGCAAAGTCAGAGATCCTTATTACTGGATGGTGGCTTTGCCCAGAGCTCTATCTGAAACGTCCTTTTCACTCTCATTCTCCCTTTAGGCTGGACGCGTTACTAGAAGAAAAGGCTAAAGAAGGAGTTAAGATCTATGTGCTTCTGTACAAGGAGGTCTCTTTAGCTTTAAAAATCAACAGCTTGTACAGTAAGAGAAGGCTTCTCAACATTCATGAAAACGTGAGAGTATTGCGGTATCCCAACCATTTATCGACTGGTGTTTATTTATGGTCGCACCATGAAAAACTTGTAATCGTTGATTACAAGATTTGCTATTTTGGAGGTCTAGATTTATGCTTTGGCCGTTACGACACAACTGAACACAAAGTGGGTGATTTCCCCTCTGAAATATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCTAATTCATGGGAAGACACCATGAGAGATGAACTGGATCGTGAAAAGTATCCCCGCATGCCGTGGCACGACGTCCATTGTGCTATTTGGGGACCTCCCTGTCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCTAAGAGAACTAAAGCTCCAAATGAACAGACCATTCCGCTACTTATGCCTCACCACCACATGGTTATCCCTCACTACATGGGAAGAAGCAAAGAGATGGATATCGATGGATGCAAAGAAGACGACAAGAAAGAAGTTGAAAGTCAGGATTCCTCTTCGTCACAGTCACCCTCACGAGATATACCATTGCTTCTGCCTCAAGAAGCTGGTGGAGAAGATCTTAAGTTAATGGGGAACAATATGAATAATAATCTCATGGATCAGACAAATTTTTGTGAAAGCCAAAATCAAAGCGACGAAACTTCAGATGCTAAGGTAGAAGGTTTACTAAATGAATTTGATCCCTTTAGCTCGGAGAGACAATCTCCCTTGGATGCTTCAGATGATGATTGGTGGGTAACACCTGAAGAAGGTTACTGCGATGCCACTGCCAAGGGATATGGAGAAGTTGGTCCTCGTACTAAATGTCGTTGTCAGGTAATCAGGAGTGTCAGCCACTGGTCTGCTGGAACAAGTCAGACTGAAGAAAGCATTCACACTGCTTATTGTTCTCTCATTGAAAAAGCGAAACATTTTATCTACATCGAGAACCAGTTTTTCATATCGGGCCTGGCAACAGATGATACTATACAGAACCGTGTATTGGAAGCATTATATAGGCGTATTTTACTGGCTCACAAAGAGCAAAAGCCTTTTAGAGTTATAATTGTGATGCCTCTATTGCCTGGCTTCCAGGGTGGGCTGGATGATGGTGGTGCAGCGACTGTGAGAGCTATAACACATTGGCAGTATCGAACAATCTCTAGAGAAAAACACTCCATATTAGCCAACCTTAGAACTGTAATTGGCCCTAAGACTGAAGATTACATTTCTTTCTACGGTCTGCGTTCTCATGGTAGACTTTCTGCCGATGGCCCTATGGTTACAAGTCAGGTCTATGTACACAGCAAATTGATGATCGTAGATGACCGTGCTGCTATAATTGGATCTTCTAATATAAATGATAGGAGTTTGCTAGGTTCAAGAGATTCTGAGATAGGAGTGGTAATAGAAGACAAAGAATATGTCAATTCATCCATGAATGGAAAGCCATGGAAGGCCGGGAAATTTTCCTATAGCCTCCGTTGCTCCTTATGGTCTGAGCACCTTGGTTTAAATACTGGAGAGGTAAATAAAATCAGTGATCCAGTAGCAGATACAACTTATAAGGACTTATGGTCAGCAACTGCAAAGGAAAATACTAGGATATACCATAAGGTCTTTTCCTGCATACCCAATGATGACATACACTCCAGAGCCGCACTTAGGCAAAAAATGGCTCACTTGAAGGAGAAACTCGGTCATACCACCATAGACCTGGGAATAGACCCTGATCAAACAGAGTACGCAGGCAGACTGAAGTGCATAAAGGGGCATCTTGTTTGTTTTCCTTTGGAATTCATGCGTGGAGAAGATTTAAGACCAGTTTTCAATGAGAGTGAGTTTTATGTGTCTCCTCATGTATATCATTAA 3216 0.4285 MSTERLIEPSDAMSEALPTSQSFRQCGEPGWIFEELPKATIVSVSRPDTGDISPILLSYTIELEYKQFKWRLMKKASQVLYLHFALKKRALIEEFHDKQEQVKEWLQSLGIFDQIAMVQDAEEPDDGAVPLHHEDSIRNRYVPSAAALPIIRPTLGGQQSVADKAKVAMQGYLNHFLGHLDIVNSREVCKFLEVSRLSFLHDYGSKMKEGYVMVRRLSNISRDSDVTCFPCEWLGFCNNNWSKVWAVLKPGFLALLDDPFSNKPVDIIVFDILPSSSEDKGSSIYLADHVIERNPLRYTFNVTSGNRSISLRTSSSAKVKDWVTKINEAGLRPREGWCRPHRFGSFAPIRGLTEDGSQAQWIIDGKAAFEAIASSIQEAKSEILITGWWLCPELYLKRPFHSHSPFRLDALLEEKAKEGVKIYVLLYKEVSLALKINSLYSKRRLLNIHENVRVLRYPNHLSTGVYLWSHHEKLVIVDYKICYFGGLDLCFGRYDTTEHKVGDFPSEIWPGKDYYNPRESEPNSWEDTMRDELDREKYPRMPWHDVHCAIWGPPCRDIARHFVQRWNHAKRTKAPNEQTIPLLMPHHHMVIPHYMGRSKEMDIDGCKEDDKKEVESQDSSSSQSPSRDIPLLLPQEAGGEDLKLMGNNMNNNLMDQTNFCESQNQSDETSDAKVEGLLNEFDPFSSERQSPLDASDDDWWVTPEEGYCDATAKGYGEVGPRTKCRCQVIRSVSHWSAGTSQTEESIHTAYCSLIEKAKHFIYIENQFFISGLATDDTIQNRVLEALYRRILLAHKEQKPFRVIIVMPLLPGFQGGLDDGGAATVRAITHWQYRTISREKHSILANLRTVIGPKTEDYISFYGLRSHGRLSADGPMVTSQVYVHSKLMIVDDRAAIIGSSNINDRSLLGSRDSEIGVVIEDKEYVNSSMNGKPWKAGKFSYSLRCSLWSEHLGLNTGEVNKISDPVADTTYKDLWSATAKENTRIYHKVFSCIPNDDIHSRAALRQKMAHLKEKLGHTTIDLGIDPDQTEYAGRLKCIKGHLVCFPLEFMRGEDLRPVFNESEFYVSPHVYH 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0010 1071 Gene3D Endonuclease Chain A 708 940 - -
Lele06g0010 1071 CDD PLDc_vPLD1_2_yPLD_like_2 738 922 - -
Lele06g0010 1071 SUPERFAMILY Phospholipase D/nuclease 320 586 - -
Lele06g0010 1071 FunFam Phospholipase 712 932 - -
Lele06g0010 1071 Pfam PLD-like domain 751 923 IPR025202 -
Lele06g0010 1071 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 878 905 IPR001736 GO:0003824
Lele06g0010 1071 PANTHER PHOSPHOLIPASE D 163 1059 IPR015679 -
Lele06g0010 1071 ProSiteProfiles PH domain profile. 205 331 IPR001849 -
Lele06g0010 1071 SMART pld_4 466 493 IPR001736 GO:0003824
Lele06g0010 1071 SMART pld_4 878 905 IPR001736 GO:0003824
Lele06g0010 1071 PIRSF PLD_euk 34 624 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele06g0010 1071 PIRSF PLD_euk 670 1071 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele06g0010 1071 SUPERFAMILY Phospholipase D/nuclease 720 925 - -
Lele06g0010 1071 Pfam Phospholipase D Active site motif 466 493 IPR001736 GO:0003824
Lele06g0010 1071 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 466 493 IPR001736 GO:0003824
Lele06g0010 1071 CDD PH_PLD 183 329 - -
Lele06g0010 1071 CDD PLDc_vPLD1_2_yPLD_like_1 359 503 - -
Lele06g0010 1071 MobiDBLite consensus disorder prediction 606 633 - -
Lele06g0010 1071 SUPERFAMILY PH domain-like 237 332 - -
Lele06g0010 1071 Gene3D Endonuclease Chain A 353 590 - -
Lele06g0010 1071 SMART PH_update 206 333 IPR001849 -
Lele06g0010 1071 Pfam PH domain 207 329 IPR001849 -
Lele06g0010 1071 Gene3D - 202 334 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0010 Lele-ChrLele06 43499 50009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0010 32 1071 Phospholipase D Gene Family (Wang group) AT3G05630 67.358 0.0 1430