Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2835 ATGAAGATGCAACCAGACGGAAGCGGAGCTGGGGCCGCCTCAGCCGCTGCTCCACCCAACCCTTGCGAAGGAGCAGAGAAGAAGAGCATAAATCCAGAGCTTTGGCATGCTTGTGCGGGACCGATGGTGAACCTGCCGCCAGCTGGTACTCACGTGGTGTACTTCCCTCAAGGTCACAGTGAACAGGTTGCAGCATCTTTAAAGAAGGATGTGGATGGTCAGATCCCAAACTATCCAAATCTCCCTTCTAAGTTGCTCTGTCTCCTTCACAATGTCACCTTGCATGCTGACCCAGAAACTGACGAAGTATATGCTCAGATGACACTTCAACCAGTGCCTTCTTTTGACAAGGATGCATTGTTAAGATCTGATCTTGCTCTCAAGTCAAGTAAATCCCAGCCTGAGTTCTTCTGTAAACAATTGACAGCGAGTGATACAAGTACACATGGAGGTTTCTCTGTCCCACGCCGTGCAGCAGAGAAGATTTTCCCTGCTCTTGATTACTCTATGCAACCACCTGCTCAAGAACTTGTGGCAAGGGATTTGCACGACAATGTCTGGACATTTCGCCATATATACCGTGATGAAAGGCAGCAGCTTCTTCTTGGTATCAGGCGAGCTAACAGACAACCCACCAATATATCATCTTCGGTGCTATCAAGTGATAGTATGCATATTGGAATTCTGGCAGCAGCAGCTCATGCTGCTGCAAACAACAGCCCCTTCACTGTGTTTTATAACCCTAGGGCTAGCCCCTCAGAATTTGTTATTCCTTTAGCAAAGTACTACAAGGCAGTGTATAGCCATCAAATATCACCTGGCACGCGCTTCCGAATGATGTTTGAAACTGAAGACTTAGGAACAAGAAGGTATATGGGTACAATTACTGGGATCTGTGATCTGGATCCTGTAAGATGGAAAAACTCACAATGGTGCAATTTGCAGGTCGGTTGGGATGAATCGACTGCTGGAGAAAGACGAAGTAGGGTTTCAATCTGGGAAATTGAACCAGTGACTGCTCCCATTTTCATCTGTCCACCTCCATTCTTCAGGTCTAAGCGACTAAGACAACCCGGAATGCCTGATGAATATCCTTCTGATTTTGATAACATTTTTAAGCGGACGATGCCTTGGCTTGGTGATGATATGTGCATGAAGGATCCTCAAGCACTCCCTGGCCTAAGCTTAGTTCAATGGATGAACATGCAGCAAAATCCTGCTCTGTCTAGCTCATTGCAGCCAAATTACATGCAACCCTTGTCTGGATCTGGTCTGCAAAACCTTTCTGGTGCAGATATTGCCCATCAGCTGGGATTTTGTGCTCCACAGATTTCTCAGTCAAGCAATGTAGCTTTCAATACTCAGAGGTTACTTCAGACCTCACAACAAGTTGATCATCTTCAGAAGATACCATCCTCGTCTAGCCCATTAGGAACGGTCATGCAGCCACCACAACAATTGGGTGATATCACTCAGCAACCTAGACAGAATATAGGAAATCAAACTCTACCTCAGAGTCAAGTTCAGAGCCAACTTCTGCATGCTCAAAATATTGTTCAGCCTAACAATATTCTTCAACAGCAGCAACTATCCATCCAAAATCATCAACTGCATAGAGACCTCTCTCAGAACCTGTCACAGCCGCAGCAGCAACAGACAGTTATGGGTCAGAATCAACGGCAAAATCTTATTCAGTCCCCAATGCCTGATCATTTCAATCAACAGTTGCAGATGTCTGACAACCAGATTCAGCATCAATTATTGCGGAAGCTTCAACAGCAACAGCAAGCACTCTTGGCACAGCAGTCAGTATTGCAGCAGTCTACTCAACTTAATCAAATCCAAGACCAGCAGAGGCAGCTTTTAGACCCAACTCAGAACTTCTCGAGGGCCCTAACTTCAAGTCAAGTGCTAGAAATTCCTCCGATACTTCAAAACTCACTTCCTGATTCTAATTCTATTCCACATCAGATGACGAAGAATAATGGCCAGACCAATAATGTTCAGTTCTCTCATCCAGCCCAGCAGGCAAAGCTTCAACAACAGCAACCTAGAACACTGTCTGAGATGTCTGGGCATTTGGGACTTCCACCTGCTCCTACTGCCAACAAACTCTCTGCTGCTGGCAGTAGCATATTAACTGGTGCAGCTGGAGCAGGGCAGTCTGTAATTACTGATGACATTCCATCTTGTTCCACTTCACCTTCCACTAATAACTGTGCCAATACTCTTCCACGTATGAATTCCTGGATCCATAGGAACAACACGATAGCGGATGATATGGCTCAATCTGCAGCCACGATCTTAAGTCCTAGTGCCTTAGAGACCATGTCATCAAATGAAAGCTTGGTGAAAGATTTTCAGCCAAAGTCTGAAGTTAAGCCTTCTTTAAATACATCCAAAAGTCAAAATCAAGGGAATTTTTCCACTCATGTATACTTAAATGGTGGAGCTGCACAGACAGATTATTTGGATACATCATCTTCTACAACTTCAGTTAGCCTTTCTCGGAATGACGCTTATATGTATCAGAATAGCAACTCATTATCTTACAATCCACAGTCAATGTTATTTAGAGACAATAATCAAGATGGGGAAATTCAGCTAGATGCTAGGAGCAATGTTCCGTTTGGCAATAATATTGATGGTCAATTGGGAGTGCCACTAAATCCAGATTCTCTTTTGACCAAAGGCACAATAGGGCTGGAAAAGGATTTGCCAAATAACATTTCTTCAGGAGGCATGCTTGGTAACTATGAGGATAACAGAGATGCTCAGCAGGAACTCTCTTCATCAATTGTTTCACAGACATTTGGAGTCCCTGATATGGCCTTTAATTCAATTGATCCCACCATAAATGATAGTAGTTTCTTAAATAGGGGTTCATGGGCACCACCTCCTCCACCACCACAGTTTCAGCGAATGAGAACGTATACCAAGGTATACAAGCGTGGTGCTGTTGGTAGATCTATAGACATAACCCGATATTCAGGTTATGAGGAGCTTAAACAGGATTTGGCTCGCAGATTTGGCATAGAGGGACAGCTGGAGGACCGGCAAAGGATAGGCTGGAAACTTGTTTATGTAGATCATGAAAATGATGTTTTGCTAGTGGGGGATGACCCTTGGGAGGAGTTTGTGAACTGTGTCCGCTGCATTAATATACTTTCCCCTCAAGAGGTGCAACAGATGAGTTTGGATGGTGATTTTGGCAACGGTGGCCTTCCAAATCAAGCCTGTAGCAGTTCTGATGGTGGAAATGCCTAA 3267 0.4454 MKMQPDGSGAGAASAAAPPNPCEGAEKKSINPELWHACAGPMVNLPPAGTHVVYFPQGHSEQVAASLKKDVDGQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVPSFDKDALLRSDLALKSSKSQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPALDYSMQPPAQELVARDLHDNVWTFRHIYRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHQISPGTRFRMMFETEDLGTRRYMGTITGICDLDPVRWKNSQWCNLQVGWDESTAGERRSRVSIWEIEPVTAPIFICPPPFFRSKRLRQPGMPDEYPSDFDNIFKRTMPWLGDDMCMKDPQALPGLSLVQWMNMQQNPALSSSLQPNYMQPLSGSGLQNLSGADIAHQLGFCAPQISQSSNVAFNTQRLLQTSQQVDHLQKIPSSSSPLGTVMQPPQQLGDITQQPRQNIGNQTLPQSQVQSQLLHAQNIVQPNNILQQQQLSIQNHQLHRDLSQNLSQPQQQQTVMGQNQRQNLIQSPMPDHFNQQLQMSDNQIQHQLLRKLQQQQQALLAQQSVLQQSTQLNQIQDQQRQLLDPTQNFSRALTSSQVLEIPPILQNSLPDSNSIPHQMTKNNGQTNNVQFSHPAQQAKLQQQQPRTLSEMSGHLGLPPAPTANKLSAAGSSILTGAAGAGQSVITDDIPSCSTSPSTNNCANTLPRMNSWIHRNNTIADDMAQSAATILSPSALETMSSNESLVKDFQPKSEVKPSLNTSKSQNQGNFSTHVYLNGGAAQTDYLDTSSSTTSVSLSRNDAYMYQNSNSLSYNPQSMLFRDNNQDGEIQLDARSNVPFGNNIDGQLGVPLNPDSLLTKGTIGLEKDLPNNISSGGMLGNYEDNRDAQQELSSSIVSQTFGVPDMAFNSIDPTINDSSFLNRGSWAPPPPPPQFQRMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCINILSPQEVQQMSLDGDFGNGGLPNQACSSSDGGNA 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2835 1088 Gene3D - 971 1065 - -
Lele05g2835 1088 Pfam Auxin response factor 232 315 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele05g2835 1088 MobiDBLite consensus disorder prediction 1 27 - -
Lele05g2835 1088 CDD B3_DNA 136 203 IPR003340 GO:0003677
Lele05g2835 1088 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 195 1065 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele05g2835 1088 Pfam B3 DNA binding domain 137 202 IPR003340 GO:0003677
Lele05g2835 1088 SUPERFAMILY DNA-binding pseudobarrel domain 126 235 IPR015300 -
Lele05g2835 1088 MobiDBLite consensus disorder prediction 463 498 - -
Lele05g2835 1088 SMART B3_2 137 232 IPR003340 GO:0003677
Lele05g2835 1088 Pfam AUX/IAA family 976 1061 IPR033389 -
Lele05g2835 1088 Gene3D - 270 341 - -
Lele05g2835 1088 FunFam Auxin response factor 971 1065 - -
Lele05g2835 1088 Gene3D - 135 210 IPR015300 -
Lele05g2835 1088 SUPERFAMILY CAD & PB1 domains 989 1055 - -
Lele05g2835 1088 MobiDBLite consensus disorder prediction 786 809 - -
Lele05g2835 1088 FunFam Auxin response factor 270 341 - -
Lele05g2835 1088 ProSiteProfiles PB1 domain profile. 976 1060 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2835 Lele-ChrLele05 43930804 43936757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2835 19 453 B3 DNA Binding Superfamily AT1G19220 66.311 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele05g2835 AUX_IAA 1.4e-06 CL0072