Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2833 ATGGCTCTCCCCCTAGCAGTCCGATGCACAAGCTCGATCCTTTCATCTCCACCCTCCTCACATCTTTCCTTCTTTAAACTTCCATTTTCGTCTCCTAAATGTTTCTTATTTTCGCGACCTGCCCTCCGCCCCCTCCCGGTCGACTTCCGACGATCTTACCCCTCTGTGAAGGCCACCTTCTCCACCTCTGATGCTTTGTCCACCTCCGCTGGCAAAGGAGATAAGAAGCTGCTGCTTCAAGTCAATGATTTGAGAGCTAATATTGTCGAATCCGATGTAGAAGTTCTTCATGGGGTCAACCTCATCGTCAACGAAGGAGAGGTTCATGCTATCATGGGAAAGAACGGTTCTGGAAAGAGCACTTTTGCAAAGATTCTTGTTGGCCATCCAGATTATAAAGTCACTGGAGGCAGTATTCTGTTCAAAGGGGAAAATCTGCTTGACATGGAACCTGAGGAAAGGGCACTTGCTGGCCTTTTTATGAGCTTCCAGTCCCCTGTTGAGATCCCTGGTGTTTCTAATTATGATTTTCTGTTCTTGCCTTACCTAATGGAGAAGGTCAATCTTGTAAACATGAGGGAAGAATTTTTAGATAGAAATGTAAATGAAGGATTTAGTGGTGGTGAACGGAAGCGCAATGAAATTTTGCAGCTTGCGGTTTTGGGGGCAGACTTGGCCATTTTGGATGAAATAGATTCTGGATTGGATGTTGATGCACTGAGAGATGTAGCAAGTGCAGTGAATCAGATTCTGACCTCAAAAAATTCTCTGTTGATGATAACTCATTACCGACGAATTCTGGATCTCCTAAATCCTACACATGTTCACATCATGGACAGTGGAAAGATTGCAAGGACCGGTGACTTATCCATGGTTGATGTTATTGAGGCGGAGGGATATGAAACAGTGCTTGATCCACTACTTTCATGCCCTTTGTTATGCCAAGAATGCCTTGCATTTGTTACAGACCCTAGCCATGCAAATAAGGTGTCTTTTACCGTCAATGAAATCGTGGTTGGTGGAGACATTTGGCAACCAGCTGGGTTCGGGATTTCGGACTTTTGGGCCGAATTGCACGGAGATCGAAAAGCAGAGGGCATAGCAATGGCGTCAAGGGTTTCTCTGAAAACGAAAGGCAAGAATTCCAAGAGCTCCAAGGCATCGGAGGAGCGATCGACGTCTCAGTGCCTGAAGGAGTGGAGCACTTGGGCTGTGAAGAAAGCCAAGGTCATCACTCACTATGGCTTCATTCCCTTGGTGATCATCATCGGTATGAACTCAGAACCGAAGCCCCATCTCTCACAGCTTCTTAGCCCCGTCTGA 1323 0.4633 MALPLAVRCTSSILSSPPSSHLSFFKLPFSSPKCFLFSRPALRPLPVDFRRSYPSVKATFSTSDALSTSAGKGDKKLLLQVNDLRANIVESDVEVLHGVNLIVNEGEVHAIMGKNGSGKSTFAKILVGHPDYKVTGGSILFKGENLLDMEPEERALAGLFMSFQSPVEIPGVSNYDFLFLPYLMEKVNLVNMREEFLDRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVASAVNQILTSKNSLLMITHYRRILDLLNPTHVHIMDSGKIARTGDLSMVDVIEAEGYETVLDPLLSCPLLCQECLAFVTDPSHANKVSFTVNEIVVGGDIWQPAGFGISDFWAELHGDRKAEGIAMASRVSLKTKGKNSKSSKASEERSTSQCLKEWSTWAVKKAKVITHYGFIPLVIIIGMNSEPKPHLSQLLSPV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2833 440 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 179 304 IPR010230 GO:0005524
Lele05g2833 440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 305 IPR003439 GO:0005524
Lele05g2833 440 SMART AAA_5 105 273 IPR003593 -
Lele05g2833 440 Gene3D - 78 304 IPR027417 -
Lele05g2833 440 Pfam ABC transporter 96 230 IPR003439 GO:0005524
Lele05g2833 440 CDD ABC_FeS_Assembly 79 300 IPR010230 GO:0005524
Lele05g2833 440 Pfam TOM7 family 398 437 IPR012621 GO:0005742|GO:0030150
Lele05g2833 440 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Lele05g2833 440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 289 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2833 Lele-ChrLele05 43906102 43911222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2833 92 290 Calmodulin-binding Proteins AT2G36910 22.066 1.99e-08 55.1