Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2819 ATGGCAAGGAAATGCTCACATTGTGGGAACATAGGCCACAATTCAAGGACGTGCTCGTCTATGAGAGGTAGTGCTTTTGTAGGGCTTCGACTCTTCGGTGTTCAACTCGACATATCGTCATCTTCTTCTTCTTGTGTTGCCACCATCAAGAAAAGCTTTAGCATGGACTCTTTGCCCTCTTCCTCATCTCCTTCTTCCTCTTTCTCTTCCTCCAGATTGGCCATCGACGATCACTCCAATAGAACTTCCCTCGGCTATCTCTCCGACGGCCTCCTCGGTCGAGTCCAAGACAGGAAAAAAGGAGTTCCATGGACGGAAGAGGAGCACCGAACGTTCCTGGTAGGGCTGGAGAAGCTGGGAAAAGGGGACTGGAGAGGAATCTCTAGGAACTATGTGACCACAAGAACCCCTACTCAAGTTGCAAGCCATGCTCAGAAATACTTCCTTCGACTTGCAACTGTTCACAAGAAGAAGCGACGTTCCAGTCTTTTTGATATGGTTGGCAGCAGTCAAGGTCACCATCATCATCCTCCTCCTCCTAAGGCGGCAGGCGATTCAGTGGAGAATATGGACACTGATTTGCAGCTTCTTGGCCTTCAAATGGAAGCCAACAACAACAACAAATCATCAGATGATAACAAGAAAATACGAGAAATTAGCGATGATGATTATAGTTCTCAACAAGCTGGTGCCAAAGTGTTGAAATCTTCCAATGCATCAGCATCACTTGATCTGGAGCTGAGTCTTACCGCTCCCAATAACACTATCCAGCAGCAAAATAATTCCCTTCTTGGTCCAATCATCAGCGTCACTTGA 816 0.4694 MARKCSHCGNIGHNSRTCSSMRGSAFVGLRLFGVQLDISSSSSSCVATIKKSFSMDSLPSSSSPSSSFSSSRLAIDDHSNRTSLGYLSDGLLGRVQDRKKGVPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATVHKKKRRSSLFDMVGSSQGHHHHPPPPKAAGDSVENMDTDLQLLGLQMEANNNNKSSDDNKKIREISDDDYSSQQAGAKVLKSSNASASLDLELSLTAPNNTIQQQNNSLLGPIISVT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2819 271 SMART sant 100 150 IPR001005 -
Lele05g2819 271 CDD SANT 103 148 IPR001005 -
Lele05g2819 271 MobiDBLite consensus disorder prediction 167 187 - -
Lele05g2819 271 SUPERFAMILY Homeodomain-like 97 152 IPR009057 -
Lele05g2819 271 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 150 IPR006447 GO:0003677
Lele05g2819 271 FunFam transcription factor MYB1R1 102 153 - -
Lele05g2819 271 ProSiteProfiles SANT domain profile. 104 152 IPR017884 -
Lele05g2819 271 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Lele05g2819 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
Lele05g2819 271 Gene3D - 102 154 - -
Lele05g2819 271 PANTHER TRANSCRIPTION FACTOR KUA1 3 235 - -
Lele05g2819 271 Pfam Myb-like DNA-binding domain 103 148 IPR001005 -
Lele05g2819 271 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2819 Lele-ChrLele05 43814271 43815366 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele05g2819 Myb_DNA-binding 1.9e-11 CL0123