Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2809 ATGATGAAACAAGTTTCTCCTAAACGTTCTTGGTCACTCCGAGGCGACGTAATGGCCGACCTATTCTTTTCCAATAACTTGCAGTTTCCTTTCATTCCTTCTTCCAAACAATTTTCAATTTCAATTCGGCACTGTTGTGTACGAGCACAGCTCCTTTCCCCTCACTCCATCTCCGCGAACATGTCGTCTGATTCTGATGCCACCTTCCCCAGTTCGTCATCTTCCGCTCCATTGCAATTGGACGATCCCCAAATCCGAAGATTGTCTATGCTTCTCCCTCTGCTTCTCAGTTTAGCACCTCCCCGCCAGGCCCCGGAATCCGATTCCGGTAGCCCCCGTGGTCGAGTCCGGATCCTCATGGTTGACCCTTCTGCTGGATCTATGATCGTGATCGAAGGCTCCGGAGATCTCCAATACGAGCTCCAGGGCCTATCGGGGAAGACCGGAGTGCTGCCGGCGTCCAAGGATTCGATTCAGGCCATGCCCAGAGTGGGGGTGACTGAAGAAGACGCGGATTGTCCGATCTGCTTGGAAGCTTACGAAATGGGCGGCGAAGCTAGGGAAATGCCTTGCAAGCATAAATTCCACTCTGAGTGTATTGAGAAGTGGTTAGGGCTCCACGGGTCTTGCCCAATCTGCCGATATGCCATGCCGGCGGAGGAGGAAAACACTAGTATCGCCATCATGGGCAGCGAGGGCGAGCAAGAGGGTGGCGAGAGGAGGGAGGGCGGTGAGGGGTTGGTATCCGTGAGTGTATGGGTGAGGTCGCTGGATGAAGAAGATGACGAAGACGAAGACGACGACGACGACGATCCGATGGAAGTGGATTCAGAGTCGGATCATGGAACCGGGGCATCCAATAGTGATTCCCGAGAAGGGAATTCTTCAGAGTATGAAGACTCGTCGATGATGATGGATCAAGAGGCACAAGACATGGAATTCTGA 945 0.5302 MMKQVSPKRSWSLRGDVMADLFFSNNLQFPFIPSSKQFSISIRHCCVRAQLLSPHSISANMSSDSDATFPSSSSSAPLQLDDPQIRRLSMLLPLLLSLAPPRQAPESDSGSPRGRVRILMVDPSAGSMIVIEGSGDLQYELQGLSGKTGVLPASKDSIQAMPRVGVTEEDADCPICLEAYEMGGEAREMPCKHKFHSECIEKWLGLHGSCPICRYAMPAEEENTSIAIMGSEGEQEGGERREGGEGLVSVSVWVRSLDEEDDEDEDDDDDDPMEVDSESDHGTGASNSDSREGNSSEYEDSSMMMDQEAQDMEF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2809 314 MobiDBLite consensus disorder prediction 254 314 - -
Lele05g2809 314 CDD RING-H2_PA-TM-RING 172 214 - -
Lele05g2809 314 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 61 218 - -
Lele05g2809 314 FunFam E3 ubiquitin-protein ligase RNF181 142 220 - -
Lele05g2809 314 MobiDBLite consensus disorder prediction 257 276 - -
Lele05g2809 314 SMART ring_2 173 213 IPR001841 -
Lele05g2809 314 Pfam Ring finger domain 172 214 IPR001841 -
Lele05g2809 314 ProSiteProfiles Zinc finger RING-type profile. 173 214 IPR001841 -
Lele05g2809 314 SUPERFAMILY RING/U-box 167 219 - -
Lele05g2809 314 MobiDBLite consensus disorder prediction 280 303 - -
Lele05g2809 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 220 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2809 Lele-ChrLele05 43759471 43760415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2809 61 255 C3H Transcription Factor Family AT1G26800 37.563 3.91e-36 127