Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2805 ATGAAGGAAACAAAAATGGGTCTTGTTCCTCTTGGCTTACTTCTTCTGGGATTTGTCTCCTCTGTCCATGGATATGGCTACGGGGGCTGGAACAATGCCCATGCAACTTTCTATGGGGGCAGTGATGCTTCAGGAACTATGGGAACTATTGTGGTCACTGCCACTAATTTTTGCCCACCAGGTGGTTGGTGTGACCCTCCCAACCTCCATTTTGATCTTTCCCAACCTGTTTTCCGGCACATTGCTCAGTACAAAGCTGGCATTGTTCCTGTTAGTTACAGAAGGGTAAGATGTAGGAGAAGAGGAGGAATAAGATTTACCATCAATGGACATTCATACTTCAATTTAGTGCTGGTTACAAATGTTGGAGGAGCTGGAGATGTGCATGCAGTGGCAATCAAAGGTTCAAGGACTAGATGGCAAGCCATGTCCAGAAACTGGGGCCAAAACTGGCAGAGTAATGCTTACCTCAATGGTCAGGCCCTTTCCTTCTTGGTAACCACCAGTGACGGTCGCTCTCACGTCTCTCACAACGTTGCCCCACCCTCTTGGTCCTTTGGCCAGACCTATACCGGACGCCAATTTCGATACTGA 594 0.4798 MKETKMGLVPLGLLLLGFVSSVHGYGYGGWNNAHATFYGGSDASGTMGTIVVTATNFCPPGGWCDPPNLHFDLSQPVFRHIAQYKAGIVPVSYRRVRCRRRGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAIKGSRTRWQAMSRNWGQNWQSNAYLNGQALSFLVTTSDGRSHVSHNVAPPSWSFGQTYTGRQFRY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2805 197 Gene3D - 46 99 IPR036908 -
Lele05g2805 197 PANTHER EXPANSIN-A15 49 195 IPR002963 GO:0009664
Lele05g2805 197 Gene3D - 103 195 IPR036749 -
Lele05g2805 197 PRINTS Expansin signature 102 114 IPR002963 GO:0009664
Lele05g2805 197 PRINTS Expansin signature 149 170 IPR002963 GO:0009664
Lele05g2805 197 PRINTS Expansin signature 50 60 IPR002963 GO:0009664
Lele05g2805 197 PRINTS Expansin signature 178 194 IPR002963 GO:0009664
Lele05g2805 197 PRINTS Expansin signature 61 78 IPR002963 GO:0009664
Lele05g2805 197 PRINTS Expansin signature 114 135 IPR002963 GO:0009664
Lele05g2805 197 PRINTS Expansin signature 78 91 IPR002963 GO:0009664
Lele05g2805 197 SUPERFAMILY Barwin-like endoglucanases 29 121 IPR036908 -
Lele05g2805 197 SMART dpbb_1 16 93 IPR007112 -
Lele05g2805 197 Pfam Lytic transglycolase 30 93 IPR009009 -
Lele05g2805 197 FunFam Expansin 103 195 - -
Lele05g2805 197 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 113 192 IPR007117 -
Lele05g2805 197 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 103 IPR007112 -
Lele05g2805 197 Pfam Expansin C-terminal domain 104 181 IPR007117 -
Lele05g2805 197 SUPERFAMILY PHL pollen allergen 100 192 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2805 Lele-ChrLele05 43741562 43742991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2805 1 196 Expansin Gene Family AT2G03090 61.417 9.06e-99 285