Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2800 ATGGAGACTCCTCTACCTAGAGTAAGAAAGGGCACGTGGTCTAAAGAAGAAGACGATCTTCTAAGAGCATGCATCCAACGTTATGGTGAAGGCAAGTGGCGCCTCGTTCCTCAAAGAGCAGGGTTGAATAGATGCCGGAAAAGTTGTAGACTGAGGTGGATGAACTACCTAAAGCCAGATATCAAGAGAGGGAACTTTACTGAGGATGAAGCTGATATGATCATGAGGTTCCATAGACTCTTGGGAAACAGATGGTCGCTGATTGCTGCGAGGTTTCCAGGAAGAACATCGAATGACGTGAAGAATTACTGGAACACCCACATAAGTAAGAAGCTGCAGTGCTCTTCCTCACAAGAAACGACCATGAAAACCCACCAAGTAATAAGGCCCCGGCCTCTAAATTTCTCCAGAAAGAGAAAGGGATTATTAGCTGAAAGAAGCGATGATAGTAGTTGCAGAGACAAGCGTATAAGCGCCATTGATAGTGACAGTGGTGAAGTGGCGGTGGTGGTCGGTGCAGATTCATCAGCAAAAGAATCAGAGAAGGAGGAGGAGTGGTGGCAAAGTTTGCTCGATGACGTTATCGTCAGCAAAGGCAATGAAGAAGACAGCTGCTTATATTGGTGTTTAGGCGGAGAGGAACAGGATAAGTTTCTGCAGCCTCAATTCTGGGACGACGACGACGACCAACAAAACTTCGTTTCTTTCAATGATCCCAAACTCCAATATGCCACAATCCCACCTTTTTATTGA 753 0.4582 METPLPRVRKGTWSKEEDDLLRACIQRYGEGKWRLVPQRAGLNRCRKSCRLRWMNYLKPDIKRGNFTEDEADMIMRFHRLLGNRWSLIAARFPGRTSNDVKNYWNTHISKKLQCSSSQETTMKTHQVIRPRPLNFSRKRKGLLAERSDDSSCRDKRISAIDSDSGEVAVVVGADSSAKESEKEEEWWQSLLDDVIVSKGNEEDSCLYWCLGGEEQDKFLQPQFWDDDDDQQNFVSFNDPKLQYATIPPFY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2800 250 SUPERFAMILY Homeodomain-like 7 104 IPR009057 -
Lele05g2800 250 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Lele05g2800 250 FunFam Myb transcription factor 10 62 - -
Lele05g2800 250 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Lele05g2800 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 61 IPR017930 -
Lele05g2800 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 112 IPR017930 -
Lele05g2800 250 Gene3D - 10 62 - -
Lele05g2800 250 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 8 168 - -
Lele05g2800 250 SMART sant 9 59 IPR001005 -
Lele05g2800 250 SMART sant 62 110 IPR001005 -
Lele05g2800 250 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Lele05g2800 250 Pfam Myb-like DNA-binding domain 63 107 IPR001005 -
Lele05g2800 250 CDD SANT 12 57 IPR001005 -
Lele05g2800 250 Gene3D - 64 131 - -
Lele05g2800 250 CDD SANT 65 108 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2800 Lele-ChrLele05 43687883 43689317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2800 8 157 MYB Transcription Factor Family AT1G66370 54.938 1.42e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele05g2800 Myb_DNA-binding 1.5e-15 CL0123