Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2796 ATGGCCAGGAAGAGAAAGAGCATTGCTAGTGTTGAAGAAACAGGAAAAGAGAAGAGTGGCAGTGAGGAAAGTATGGGGTGGGAGGAGATGGTGAAGGAGGCTGCTGCGTTGGGAGGTCTCCGGCGAGCCCGCAAGAGATTCTTGGGGGTCCGGCAACGTCCTTCAGGGAGGTGGGTAGCGGAGATAAAAGACACCATACAAAAGATAAGGGTGTGGCTTGGCACTTTTGACACTGCAGAGGAAGCAGCCAGAGCTTATGATGAAGCTGCTTGCTTGCTTCGAGGAGCCAACACCAGAACAAATTTCTGGCCTTGTCAATCTCAATCCAATTCTTCAACCCCTGCTCTTTCTTCAAAAATCACCAATCTTCTCCTTCAAAGACTCCAAGCAAGAGATGACCAAATCCATAACTCTTTACCTTCTTCTTCCTCCTCCTCCTCTGTTTCTTCCCTGCTTGTCAGTCAGCAGCAGGACCAAGAAGGAGAGGAAAAAACTGAGTTCTCAATGGACAAGTTCACTGACTTTCTTAATGATCCTGATGATTATTACACCACAACAAGCAACAACAGCGAACAGTTTGATTACCTTACTCGTAGTTTCGAGTCGTGTTTGACCGAGAACAACGAGTGCAAGGAAGGAGCAGAGATAATTGGCGATTCAGGTGTGGAAAAAGAGGAAGAAAGCAGTAGAGAGCTTGATATGGGGTTGCAGGATTTTGAGTTTCTGGACAGCGTGGTGCCATCATCATGGCACAACTATTCGCCATTCGAGCTGGTTCGAGAAATGGAGGAGGAGGAGGAGGAAGAGGGAGAGAGCTATGGTGGTGGGGATGAGCCTTCTATGCTGAGGGCAGCCATGAAGAGGATGAAGTATGAGAGGAGGTTCTCTGCTTCTCTGTATGCCTTCAATGGGATATCAGAATGCTGGAATTTGAAACTTGGATCGGCAAACTTGAAGGGAAGAACAGTTTCTGAGCAACTATCTAATCTCCAGATGGCATGTTCCAGTAGGAACAAAGTTGAGAACAAAGAGATCAATACCAAAGAAGAAGAAAGCAGCCCAGAAGCATCAAATGATATTTCTGAGTCCACCTCCTCCTCTTCTTCCTCTTCTTCTTCTAGTAGTAATGATACCGAATTGATTTGGAATTCACTGGATCTTCCTCCAATTGCTTTGTTAGCTAGTTTTGCAAGATTCATTTTCCTGTTATCGTTTTGCTCTGTGGCAAATGATCGAGTTAAACTTTTACTAAAAGGGGTTTCAATTGATGCGCTTGAGATGGACAATCCATCTGCCTTCATAACCGAGGATTGTCAAATATCTTCGTCCCAGGAAGAAATCCTGAGTCGTTGCCCTCTGACCGAAGACCCTTTTAACTCACCCGGTGACGGAGTACCGCCGACGCTCCCGGAGACTGCTCAAGACGCTGGTGGCGATATGGGTTGCCGAGACATTTGCATTACCCCGCCAGAGAAGCAACCGCCCGCATTCGACTTTCGGCCTTGCACACGTCACAAGGCAGTTCAGACTGATGATGAGACCCAAGATTTCGATTATTTCACTAGGATCGCAGGTCCACGTGTTGATCTGAGTAATGATTCAGATTTAGGATCTCCACTAGCCCAATTAATCCAGATGACTGAACACACACTGGTGGCGGGCTGCTCGGGCGGGAACTATGGAGGAAGTGTAATTGAGATTTCCAATCGGGAAATAGACAAATTTCAGATTTCGGGTTTAGAATTGTCTCCAAGGGATAACAACGGTGAGCTACCACATAAAATAATGAAGACTTCGGTGAAAATTCCGGGCTCCAAATCTTCACAGGCATGTTCCGAGATTGAACCACAACAAAATGAAGATAATTTGCAGACTTGTGAACGGAATGTGGGTTCTAACCAAAAGAGTCACTGCAACTTTGCGACTGATCCCCAGCCTCAACAAAACATTCAAATTGGTAATGAAACGCCTTTGGGAGTCAGCGGCAAGAAAAAGGATTTCTCAGGGATTTCAGCAGGGAAAAACTTGGGGTCTGGTGGGAATCTGGAAAGCCACATTAGTCAATCGGAAATTGCAAGAAACGATGAAGAATGTGTTAAAAATTTTGAAAGCAAAGGCACAAAGCGGCAAAAGTTAAGGATGGTTCTTCCATTTTCAATCCATGCATGTTTGAAGGACATAGCAAAAAGGAAAAAAGAAAATGGAGAAGACGTTAATTTTGTTTTTGATGTATTCAAATGTCTCACACAAGGGTCTTCTAAAAAAGAGAGCCTAGGAAGTGTTAGTTGGTTGGAACTGGCAAAATCTAAAGGCATCATTTATCCCACTCCAAGGTGGTGGAAGGAGACAGACAACTGA 2358 0.4512 MARKRKSIASVEETGKEKSGSEESMGWEEMVKEAAALGGLRRARKRFLGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCQSQSNSSTPALSSKITNLLLQRLQARDDQIHNSLPSSSSSSSVSSLLVSQQQDQEGEEKTEFSMDKFTDFLNDPDDYYTTTSNNSEQFDYLTRSFESCLTENNECKEGAEIIGDSGVEKEEESSRELDMGLQDFEFLDSVVPSSWHNYSPFELVREMEEEEEEEGESYGGGDEPSMLRAAMKRMKYERRFSASLYAFNGISECWNLKLGSANLKGRTVSEQLSNLQMACSSRNKVENKEINTKEEESSPEASNDISESTSSSSSSSSSSSNDTELIWNSLDLPPIALLASFARFIFLLSFCSVANDRVKLLLKGVSIDALEMDNPSAFITEDCQISSSQEEILSRCPLTEDPFNSPGDGVPPTLPETAQDAGGDMGCRDICITPPEKQPPAFDFRPCTRHKAVQTDDETQDFDYFTRIAGPRVDLSNDSDLGSPLAQLIQMTEHTLVAGCSGGNYGGSVIEISNREIDKFQISGLELSPRDNNGELPHKIMKTSVKIPGSKSSQACSEIEPQQNEDNLQTCERNVGSNQKSHCNFATDPQPQQNIQIGNETPLGVSGKKKDFSGISAGKNLGSGGNLESHISQSEIARNDEECVKNFESKGTKRQKLRMVLPFSIHACLKDIAKRKKENGEDVNFVFDVFKCLTQGSSKKESLGSVSWLELAKSKGIIYPTPRWWKETDN 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2796 785 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Lele05g2796 785 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Lele05g2796 785 MobiDBLite consensus disorder prediction 357 375 - -
Lele05g2796 785 FunFam ethylene-responsive transcription factor RAP2-11 45 104 - -
Lele05g2796 785 SUPERFAMILY DNA-binding domain 47 103 IPR016177 GO:0003677
Lele05g2796 785 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Lele05g2796 785 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Lele05g2796 785 MobiDBLite consensus disorder prediction 136 158 - -
Lele05g2796 785 MobiDBLite consensus disorder prediction 136 168 - -
Lele05g2796 785 MobiDBLite consensus disorder prediction 338 375 - -
Lele05g2796 785 Pfam AP2 domain 48 95 IPR001471 GO:0003700|GO:0006355
Lele05g2796 785 MobiDBLite consensus disorder prediction 341 355 - -
Lele05g2796 785 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 19 296 - -
Lele05g2796 785 CDD AP2 45 102 IPR001471 GO:0003700|GO:0006355
Lele05g2796 785 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Lele05g2796 785 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2796 Lele-ChrLele05 43652285 43655214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2796 44 124 AP2-EREBP Transcription Factor Family AT5G19790 71.429 5.72e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g2796 AP2 1e-13 CL0081