Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2795 ATGCTAAACACTTCCATCTTCCTTAAAAGTAGCAATCTGCAATCAAGCCAAAACTTTATATCCCTTGGCAATGGGATTCCCGTTCAAGATTTGAGAATGGATGGTTCAACTGGCCGTGCCAGCAGTGCAGATGTGTTTTTACCAAATTATAAGTTGGGGAAAACACTTGGCATTGGATCCTTTGGCAAGGTGAAAATTGCAGAGCATATATTGACTGGCCATAAAGTTGCCATTAAGATCCTTAATCGACGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCACCCTCACATAATACGACTTTACGAGGTCATAGAAACCCCAACAGACATATATGTTGTTATGGAGTATGTAAAATCCGGTGAACTCTTTGATTACATTGTGGAAAAGGGTAGGCTGCAAGAAGATGAAGGCCGCAATTTTTTCCAGCAGATAATCTCTGGTGTGGAGTACTGCCACAGAAATATGGTGGCTCATAGAGACCTTAAGCCAGAGAATTTGCTTTTGGACTCCAAATGCAATGTCAAAATTGCTGATTTTGGTTTGAGCAACATCATGCGTGATGGTCATTTTCTTAAGACCAGTTGTGGAAGCCCAAACTATGCTGCTCCAGAGGTTATATCTGGAAAATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATATGCTCTTCTCTGTGGTACCCTTCCTTTTGATGATGAAAACATTCCAAACCTTTTTAAGAAAATAAAGGGTGGGATTTATACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATTTGATACCCAGGATGCTTGTGGTTGATCCCATGAAGAGAGTGACCATACCTGAGATTCGTCAACACCCATGGTTTCAAGCCCACCTCCCTCGTTATTTAGCTGTGCCCCCACCAGATACAGTGCAACAAGCAAAAAAGATTGATGAGGAACTTCTTCAGGAAGTTGTTAACATGGGATTTGATAGGAATCAACTGGTTGAATCTCTCCAGAACCGGATACAAAATGAGAGTACTGTAGCATACTATTTGTTATTGGACAATCGGTTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAATTCCAAGAGACAATGGATTCTGGTTTTAACCGTATTCATCCTAGTGGAGTTACTGCCCCAGTTGTTGGTCACCGCCTTCCAGGGTTTATGGATTATCCAGGAGCAACATTAAGATCCCAGTTCCCTGTTGACAGAAAATGGGCCCTTGGGCTTCAGTCTCGTGCTCATCCTCGCGAAATAATGACCGAGGTCCTCAAAGCTCTGCAAGAACTAAATGTGTGTTGGAAAAAGATTGGACCTTACAACATGAAGTGCAGATGGGTTGCTGGCAATCCTGGTCATGACGGAATGGTAGACAGTACTTATGGTAGTCATTACTACAGAGATGATGCCACCATCATTGAGAACGATTCTGTTTCTAAGCCAAATGTGGTCAAGTTTGAACTTCAGCTTTACAAAACTCGGGAGGAGAAATATCTGCTCGATCTTCAACGGGTCCTGGGCCCACAGTTTCTGTTTTTGGATCTTTGTGCCGCTTTCCTGGCACAACTTCGTGTGCTCTAA 1632 0.424 MLNTSIFLKSSNLQSSQNFISLGNGIPVQDLRMDGSTGRASSADVFLPNYKLGKTLGIGSFGKVKIAEHILTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEGRNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTVQQAKKIDEELLQEVVNMGFDRNQLVESLQNRIQNESTVAYYLLLDNRFRVSSGYLGAEFQETMDSGFNRIHPSGVTAPVVGHRLPGFMDYPGATLRSQFPVDRKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGPYNMKCRWVAGNPGHDGMVDSTYGSHYYRDDATIIENDSVSKPNVVKFELQLYKTREEKYLLDLQRVLGPQFLFLDLCAAFLAQLRVL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2795 543 SUPERFAMILY Protein kinase-like (PK-like) 46 324 IPR011009 -
Lele05g2795 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lele05g2795 543 CDD AMPKA_C 421 540 - -
Lele05g2795 543 Pfam Protein kinase domain 50 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2795 543 FunFam Non-specific serine/threonine protein kinase 41 380 - -
Lele05g2795 543 CDD STKc_AMPK_alpha 47 302 - -
Lele05g2795 543 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 494 542 IPR001772 -
Lele05g2795 543 CDD UBA_SnRK1_plant 324 364 - -
Lele05g2795 543 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Lele05g2795 543 SUPERFAMILY KA1-like 359 542 IPR028375 -
Lele05g2795 543 PANTHER SERINE/THREONINE KINASE 49 367 - -
Lele05g2795 543 SMART uba_6 325 362 IPR015940 -
Lele05g2795 543 Pfam Kinase associated domain 1 500 542 IPR001772 -
Lele05g2795 543 Gene3D Transferase(Phosphotransferase) domain 1 41 380 - -
Lele05g2795 543 FunFam Non-specific serine/threonine protein kinase 426 541 - -
Lele05g2795 543 ProSiteProfiles Protein kinase domain profile. 50 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2795 543 SMART serkin_6 50 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2795 543 Gene3D Kinase associated domain 1, KA1 426 541 - -
Lele05g2795 543 SUPERFAMILY UBA-like 312 361 IPR009060 GO:0005515
Lele05g2795 543 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 323 363 IPR015940 -
Lele05g2795 543 Pfam UBA/TS-N domain 324 360 IPR015940 -
Lele05g2795 543 FunFam Non-specific serine/threonine protein kinase 39 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2795 Lele-ChrLele05 43644382 43650142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2795 50 302 CBL-interacting serine-threonine protein kinases AT4G24400 52.362 5.76e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Lele05g2795 Pkinase 1.4e-79 CL0016