Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2794 ATGGCAACAGCGCTGTCGAGATTGGAGCTCACTCATCACAGCAAATTCACTCTTGGAGAAGATGGGGTGATTGAGCCTCAAGTCAACATGTTTAATACTGGGAAGCTTGAGTCCAAGTTATCAGGTCTAAATGCACTGCAAAATTCGTCGAGCTTGACAAAAAATGCGCCACGTTTGATCAGATCAGGAATTGTGAGCAAGGCTTTGCAATTTCTATACACTCTCTCGAAAGATCTAACGGAAGAGTTGACAGAACATCTTCTTGATAGCCGTCTTTTTAAAATTGTCAATATTATCTCATCATCAACATCTGAGAGTGAAAAGGTTGTTGCTGTTGGTTTACTGAGTAATCTTTCCATTAGTGATAAGAAAGTCACAGATGTACTGAAGAGGGCAAATTTGCTCCCTATGTTAACATCCATTATGTCTTCAAGCATGGGAAGTAATTCACCAGCAGCAAGTTGCTTATTGCAGAATGTCGTCGGTGGTATAGTCCGGTTCACGAATCCTTCTGACAAGAAACTACAGCTTCTCTCAGCAGAACACGGCGTAATTCCTTTGTTGGTAAAACTGCTCTCAACTGGGTCACCGATCACAAAATCCAGGGCTGCAACCTCGCTCCATTATCCCAGAATTCTGTGTCTCTTGGGAGTCAAAGCCGGCACGGTTCATTCACTCATCCAAATATTAGAAGATAAAGAGAAGGAAGCCGTTGAAGCTGCTTTGATTGATCTCTCAACTTTATTACAAGATAAACTATGGGAAGGTGGTGTGAACTGTATAGCTAAATCCTCAGGTGTTCAGGCTGTTATAAAGATTTTAGAAGTTGGGGATGTAAAGTTCCAAGAGAAAGCACTTTGGATATTGGAGAGGATATTCAGGGTTGAAGAACAGAGTTCAATTTGGAGAATCTGCTCAGATTCTGAATTTTTATTTTTTGGTGGAACTCATATGCAGCCACATCATAATAATACAGACACTCCTCGTACAGTTGACCAAGAAACCATGGACAAGAACAGCAAAAACCAGAACCATCTTGCCCAGGATATGAACTTGAGCTCTGCTGAAAAGAAGCTTGTGCAAGCATACAATGAAAAACCAGTACTCTCACGCCCTCAACGCAGCTTTTATAAGGGTCCTAACAACTTTGTGATCGATCTGGACATTCATCGGTTCCGCTACATATGGAGAAAAAGGCTTGAAGCATTTCGAGAACGTCTGAAAGATGGAATTCTTGATCTGGGTTTAACCATTCAGTACAAGCTTTCATCCCTATCCTATTGTGCATATGCTGGCTAG 1299 0.4157 MATALSRLELTHHSKFTLGEDGVIEPQVNMFNTGKLESKLSGLNALQNSSSLTKNAPRLIRSGIVSKALQFLYTLSKDLTEELTEHLLDSRLFKIVNIISSSTSESEKVVAVGLLSNLSISDKKVTDVLKRANLLPMLTSIMSSSMGSNSPAASCLLQNVVGGIVRFTNPSDKKLQLLSAEHGVIPLLVKLLSTGSPITKSRAATSLHYPRILCLLGVKAGTVHSLIQILEDKEKEAVEAALIDLSTLLQDKLWEGGVNCIAKSSGVQAVIKILEVGDVKFQEKALWILERIFRVEEQSSIWRICSDSEFLFFGGTHMQPHHNNTDTPRTVDQETMDKNSKNQNHLAQDMNLSSAEKKLVQAYNEKPVLSRPQRSFYKGPNNFVIDLDIHRFRYIWRKRLEAFRERLKDGILDLGLTIQYKLSSLSYCAYAG 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2794 432 Gene3D - 211 309 IPR011989 -
Lele05g2794 432 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 356 419 IPR009769 -
Lele05g2794 432 SUPERFAMILY ARM repeat 63 297 IPR016024 -
Lele05g2794 432 Gene3D - 1 210 IPR011989 -
Lele05g2794 432 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 218 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2794 Lele-ChrLele05 43636136 43640399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2794 183 289 U-box Gene Family AT1G23030 34.211 1.23e-06 48.9