Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2793 ATGGCCACTAAAAATGGCCATTCCCTCGCGCCATCGCCGCCTCGTCCGGCCATCAACCTCCCGCCCCGACCTTCCATGGAGGCCTTCTTCACCAGTGGACCCGGTCTAAGCCCTGGCCCCATGACTCTCGTCTCCAGCTTCTTCTCCGACTCCTACCCTGACTCCGATTGCCGCTCTTTCTCTCAGCTTCTCGCTGGAGCCATGGCTTCGCCTCTTGCTCTCGGCACCAGGCCTAGTTTCCTTCCGGACAATTCAACCAGCAATTCCTCCACTTCTGAGGATGCAGCTAAGAAGAATTTGGGGTTCAAGCAGAGTAGACCAATGAATTTGGTTGTTGGTCGTTCCCCATTGTTTACAATCCCGCCTGGGCTTAGCCCTTCTGGTTTGCTAAATTCTCCTGGCTTCTTTTCGCCGCAGGTGGACGGTGCTTGTTTTGAAAAGAGCCCCTTTGGGATGTCCCACCAACAGGCTCTAGCGCAGGTTACTGCTCAAGCTGTCCTAGCACAATCACAAATGCATGCTCAAGGCAATTTTCACCCATCCGTGGTAACAGCCCCTTCGGAACCATTGGCAGTGCAGCCATCCAGCACTCCGGGTGAAGGATTAGAGCTGCAAGTGGTATCGGCAGTATCGGAACCTAAAGGTTCCCTAGTGGAAATATCAGAAATTTCTCATGCTGATAACAAATATCAAGCTTCTTCTATAGGTGTTGACAAACCAGCGGATGATGGCTATAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGGAGTTACTATCCTCGGAGCTACTACAAGTGTACGCATCTGAATTGCCCTGTAAAGAAAAAGATTGAGCGGGGCCATGATGGCCATATAACTGAAATTATCTATAAAGGCCAGCATGACCATGAAAAGCCTCAGCCCAATAGGCGTGCTGCCAAAGATAATTGTGAATCAAATGAAAATAAAAGCATTCAAGTTATGTCTGAGTCAAATACAAAGGGTTGTGTTGGGAATCCGAATGTGTTAGGCGAAAGCATGCCTGACCATTCAATGCCTGAGAGTGACCACACCTCCAATCAAGAGGCTCCAAGACAGTCATCTGGATCACATGGGAGTGAGGAAGCACTTGATGCAAATATTACAGAAGATGGAGATGCTAAAGTTCTGCTTTGCAGGAGCACTAAGGATGGAGCTTCTGAAGCATCTTTGTCCCACAAGACTGTTACAGAACCTAAAATCATCTTGCAAACAAGAAGCGAAGTTGATCTGCTAGATGATGGCTACAGGTGGCGCAAGTATGGGCAGAAAGTAGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACTTTTGCAGGATGTAATGTGCGTAAGCATGTTGAGAGATCTTCAACAGACCCAAAAGCTGTCATAACTACGTATGAGGGAAACCATAACCATGATTTGCCTGCTTCTAGACATTGCAGCCACATCACCTCAGCTACTACCAATTCAATGCCTTTAAAACAATATAGAGTGACTCCTGGGAACAATGAGAAAAACGGAGTATATATATAA 1545 0.4744 MATKNGHSLAPSPPRPAINLPPRPSMEAFFTSGPGLSPGPMTLVSSFFSDSYPDSDCRSFSQLLAGAMASPLALGTRPSFLPDNSTSNSSTSEDAAKKNLGFKQSRPMNLVVGRSPLFTIPPGLSPSGLLNSPGFFSPQVDGACFEKSPFGMSHQQALAQVTAQAVLAQSQMHAQGNFHPSVVTAPSEPLAVQPSSTPGEGLELQVVSAVSEPKGSLVEISEISHADNKYQASSIGVDKPADDGYNWRKYGQKQVKGSYYPRSYYKCTHLNCPVKKKIERGHDGHITEIIYKGQHDHEKPQPNRRAAKDNCESNENKSIQVMSESNTKGCVGNPNVLGESMPDHSMPESDHTSNQEAPRQSSGSHGSEEALDANITEDGDAKVLLCRSTKDGASEASLSHKTVTEPKIILQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTFAGCNVRKHVERSSTDPKAVITTYEGNHNHDLPASRHCSHITSATTNSMPLKQYRVTPGNNEKNGVYI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2793 514 MobiDBLite consensus disorder prediction 1 33 - -
Lele05g2793 514 MobiDBLite consensus disorder prediction 292 312 - -
Lele05g2793 514 ProSiteProfiles WRKY domain profile. 414 479 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 FunFam WRKY transcription factor 228 301 - -
Lele05g2793 514 MobiDBLite consensus disorder prediction 313 333 - -
Lele05g2793 514 Pfam WRKY DNA -binding domain 420 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 Pfam WRKY DNA -binding domain 242 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 SMART WRKY_cls 419 478 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 SMART WRKY_cls 241 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 MobiDBLite consensus disorder prediction 351 369 - -
Lele05g2793 514 Gene3D WRKY domain 404 480 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 Gene3D WRKY domain 228 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 135 495 IPR044810 GO:0003700
Lele05g2793 514 SUPERFAMILY WRKY DNA-binding domain 240 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 SUPERFAMILY WRKY DNA-binding domain 411 479 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 ProSiteProfiles WRKY domain profile. 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g2793 514 MobiDBLite consensus disorder prediction 292 369 - -
Lele05g2793 514 FunFam WRKY transcription factor 33 406 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2793 Lele-ChrLele05 43631685 43635094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2793 15 486 WRKY Transcription Factor Family AT2G03340 48.460 9.06e-125 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele05g2793 WRKY 4.5e-26 CL0274