Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2784 ATGTCCGTTGTTGTAGGATTTCATTTGATCCTAAATATGGATATCTGGAACGGAAGTGAGGCTAAAAATCTCCCTCAAGGTTTCCCTGATCTTTACTTCTCATGGAAATTCATTAGGAACCCTAGATTGATTCTGCTAGTCTTCTGCTCCTCCATTGATGACGGTTACCAGCTCTGGAGCTACTACATGTTCATTGCAGTGGTTCGTAAATATAGTTTATCTACAAAGGAGGGGAGACCCAAAATTGAAAACCTGAGTTTATGTCATCACTTGATCAATTGCCTCACAAAAAAATTATATATTCGCAATTTGGTGTCCAAGAAACGGCGGAGAATGCTTATTGCTGGGTATGATCTTGATATGTCATATATCACTGATCGATTGCTAGCAATGTCATTTCCTGCAGAACGTATGCGAGCAATGTATAGAAATCCTCTCTGGCAGGTCAAATCTGTGTTGGATATGAGACATTATGATCACTATAAGATATATAATCTATGTATAGCAGAGAATTATGATCCAGCACACTTTTATGGTCGTGTGGAAGCATATCCCTTTGATGACAACCATGTACCACCTCTTGAAATGATCAAGAACTTCTGTGAAAGTGTGCATTCGTGGTTATCAAGTGACCCAAAAAATATTGCTGTCATTCATTGCATGGCAGGGAAGGGTAGAACTGGATTGATGGTATCTTCATACCTAGTTTATTGCGGCATGTCGACAGATGAGGCTCTTCAATTGTATGCTGATAGACGGACAACCAATAACGAAGGAGTATCGATACCAAGCCAACGTCGTTATGTAGGGTACTGGGAAAGTATGCTATCTGTTCCTAGAGGAATTAGTAATGAACCAATAAACGCGAGCTTGCCTCAACCATGTAGCAGAGAATTGCGGCGAATCCGGCTTTATGATACGCTTAATGTTGAAGCGATCTTCTTTGTGATGTTAGAGATGCAGAAGGTTCCTAATCAAGTCTACTGTCCGTCAGTGGAGACTTTTAGGAGCAGCTGCAGACAAATTAAGAAAGGATATCAGGAAACCTACAGTCCTCGCTATTATCTCTCTTATGTCGAAGGCGATGAAGATGGACACGAATCAAAATTAGAGGAACCTCGTGTTGTAGTCCAAATGGACACAGAGGATCCGGCTATCTACCAAAAATCTTGTCTGGACCATTATTTTGACAAACCAGTCCAATTAGTTGAAAATGATAGTCTATTCAGGTTAAAGAACTCTGCTGCTTGTCTTACTGGAGATGTTCGTGTCATATTCTACCAAAAAATGATGGGAAGCCGCCTTTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAATGGCTTGCTACAGCTGAAGATGAAAGATATGGATAAAGTAGGGAATAGGGGAAGATCAATCTGTGGGCCATCGTTTTGTGTAGAGCTTCTGTTTGGCCCTGCCAACATGAAACACTCGGCAACTCTATCTAATGATGAAGATTCCGGAGATGAATATCCTTAA 1503 0.4059 MSVVVGFHLILNMDIWNGSEAKNLPQGFPDLYFSWKFIRNPRLILLVFCSSIDDGYQLWSYYMFIAVVRKYSLSTKEGRPKIENLSLCHHLINCLTKKLYIRNLVSKKRRRMLIAGYDLDMSYITDRLLAMSFPAERMRAMYRNPLWQVKSVLDMRHYDHYKIYNLCIAENYDPAHFYGRVEAYPFDDNHVPPLEMIKNFCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVSSYLVYCGMSTDEALQLYADRRTTNNEGVSIPSQRRYVGYWESMLSVPRGISNEPINASLPQPCSRELRRIRLYDTLNVEAIFFVMLEMQKVPNQVYCPSVETFRSSCRQIKKGYQETYSPRYYLSYVEGDEDGHESKLEEPRVVVQMDTEDPAIYQKSCLDHYFDKPVQLVENDSLFRLKNSAACLTGDVRVIFYQKMMGSRLFYCCFNTAFIRNGLLQLKMKDMDKVGNRGRSICGPSFCVELLFGPANMKHSATLSNDEDSGDEYP 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2784 500 Pfam Tyrosine phosphatase family 212 251 IPR026893 GO:0004721
Lele05g2784 500 Gene3D - 367 483 - -
Lele05g2784 500 Gene3D Protein tyrosine phosphatase superfamily 96 278 IPR029021 -
Lele05g2784 500 Pfam C2 domain of PTEN tumour-suppressor protein 397 478 IPR014020 -
Lele05g2784 500 ProSiteProfiles C2 tensin-type domain profile. 310 481 IPR014020 -
Lele05g2784 500 ProSiteProfiles Phosphatase tensin-type domain profile. 110 279 IPR029023 -
Lele05g2784 500 ProSitePatterns Tyrosine specific protein phosphatases active site. 218 228 IPR016130 GO:0016311|GO:0016791
Lele05g2784 500 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 116 276 IPR029021 -
Lele05g2784 500 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 100 493 - -
Lele05g2784 500 SMART PTEN_C2_2 308 480 IPR014020 -
Lele05g2784 500 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 97 279 - -
Lele05g2784 500 CDD PTP_PTEN 120 273 IPR045101 GO:0016791
Lele05g2784 500 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 405 480 IPR035892 -
Lele05g2784 500 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 198 253 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2784 Lele-ChrLele05 43592564 43597892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2784 90 493 Protein tyrosine phosphatase (PTP) family AT5G39400 64.778 0.0 540