Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2783 ATGATAAGCTGTGTTTTGTTTCTGCCCAAGGTGTACCACAGCATCATCTTGATGAGAAGAATGAAAAAAGTCACCGGCTACATCTTTGGCACCATTTGGTGGGGATTTGGCCTCAATCTCATAGCTTACTTAATTGCTTCTCACGTTACGGGAGGGTGCTGGTATGTGCTGGCAATTCAACGTATTGCATCATGCCTGCAGAAGCAGTGTGAAAGTAGTCCTGGTTGTAATCTCTCTCTTTCATGCTCAGAGCAGGTATGCTACCAGTTTCTGTTGCGAAAAAGCACAACACTAGAAAATCATCCATGTGCTGGAAACTCCACGGTAGTGGTGAGAAAGACTTCGTGCTTCGATCTTGAAGGACCTTTCAATTATGGCATCTACCAGTGGGCTCTTCCAGTCATATCCAGCAATTCCTTGGCTGTCAAGATTCTATATCCCATATTCTGGGGTTTGATGACTCTCAGCACCTTTGGCAACGTTCTTGAACCCACAAGTCACTGCCTGGAAGTAATTTTCAGCATTTGCATTGTACTGAGTGGATTACTGCTTTTCACTTTGTTGATTGGGAACATCCAGGTATTCCTACTTTCAGTAATGGCAAAGAAGAGAAAGATGCAGATGAGATGTCGTGACATGGAGTGGTGGATGAGGAGGAGGCAGCTGCCATCCCACTTAAGACAAAGAGTTCGCCGTTTTGAGCGTCACAGATGGGCCGCCATGGGAGGAGAGGACGAAATGGAATTGATCAAGGACTTGCCTACTGAAGGTCTCAGGAGGGACATCAAGCGCTTTCTATGGTTAGACCTCCTCAAAAAGGTGCCTCTGTTTCACCACTTGGATGATCTTATTCTTGATAACATATGTGACAGGGTTCAACCCTTAATCTTCTCTAAAGATGAAAAGATAATTAAAGAAGACGACCCAGTGAAAAGGATGGTGTTCATTGTTCGAGGACGAATAAAACGTATCCAAAGCCTAAGCAAAGGCATGATAGCGACGAGTAACCTTGAAGTAGGAGGTTTTGTGGGTGATGAACTGCTGTCATGGTGTCTTCGCCGACCTTTCATAGACCGGCTTCCGGCGTCCTCTGCAACATTTGTGTGCGTTCAATCAACAGAAGCCTTTGGCCTGAATGCTGAACACCTTAAGTACATTACGGATCACTTCCGCTACAAATTTGCAAATGAAAGACTCAAGAGAACAGCCAGGTATTACTCTTCCAATTGGCGAACCTGGGCTGCTGTTAATATCCAACTTGCTTGGCAAAATTACAGGAAAAGAAGTAGAGGTTCAGTGCTTTCTGTAACTGATGAAAATGGAGCCACTGGACGCAGGCTTCTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATAA 1395 0.4473 MISCVLFLPKVYHSIILMRRMKKVTGYIFGTIWWGFGLNLIAYLIASHVTGGCWYVLAIQRIASCLQKQCESSPGCNLSLSCSEQVCYQFLLRKSTTLENHPCAGNSTVVVRKTSCFDLEGPFNYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNVLEPTSHCLEVIFSICIVLSGLLLFTLLIGNIQVFLLSVMAKKRKMQMRCRDMEWWMRRRQLPSHLRQRVRRFERHRWAAMGGEDEMELIKDLPTEGLRRDIKRFLWLDLLKKVPLFHHLDDLILDNICDRVQPLIFSKDEKIIKEDDPVKRMVFIVRGRIKRIQSLSKGMIATSNLEVGGFVGDELLSWCLRRPFIDRLPASSATFVCVQSTEAFGLNAEHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWQNYRKRSRGSVLSVTDENGATGRRLLQYAAMFMSIRPHDHLE 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2783 464 CDD CAP_ED 276 386 IPR000595 -
Lele05g2783 464 Pfam Ion transport protein 11 193 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele05g2783 464 SUPERFAMILY Voltage-gated potassium channels 10 238 - -
Lele05g2783 464 ProSiteProfiles cAMP/cGMP binding motif profile. 276 355 IPR000595 -
Lele05g2783 464 SUPERFAMILY cAMP-binding domain-like 202 390 IPR018490 -
Lele05g2783 464 Gene3D Jelly Rolls 274 392 IPR014710 -
Lele05g2783 464 Gene3D Helix hairpin bin 201 266 - -
Lele05g2783 464 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2783 Lele-ChrLele05 43588216 43591383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2783 9 464 Ion Channels AT5G15410 75.000 0.0 687