Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2741 ATGAACCTCAACAGCAGCGCCGTTGCATTCACCTTTGGTATCATCTTTCTAATCCTATCCATCTGTTTAGCCTGCCTCCGCCTTCCCCAGCTCTCCGGCAACCCCGCCCTGTTCAATTTCCTTCCTCGTTCTCCTGATGGTTCTACCGCCGGCAGCGCCGCCGTGAATCTCACCGTAGCAGAACGTGGGCTCGATGACTCCACTATCAACACCTTACCCAAGCTCTCCTACTGTGAGATGAAGAAAAGCTCTTATAACAACATTGAAGATCCTTCTAATAATTCTTCTTCTTGTTCCATCTGCTTAGAGGATTATAAGGAAGACGACATGTTAAGGTTGCTTCCTGATTGTGGCCATGTTTATCATCTTCGTTGTGTTGACCGGTGGCTCAAGTTACACAACACTTGCCCTATCTGTCGAACTCAAATCTCCTCTTCTTCGTCTGTTAAAGCTCACGGCGATGATCGCTCAAATAACTCCGTCGACGGCCGGGACATAGTTTGA 504 0.4821 MNLNSSAVAFTFGIIFLILSICLACLRLPQLSGNPALFNFLPRSPDGSTAGSAAVNLTVAERGLDDSTINTLPKLSYCEMKKSSYNNIEDPSNNSSSCSICLEDYKEDDMLRLLPDCGHVYHLRCVDRWLKLHNTCPICRTQISSSSSVKAHGDDRSNNSVDGRDIV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2741 167 SUPERFAMILY RING/U-box 97 146 - -
Lele05g2741 167 FunFam E3 ubiquitin-protein ligase ATL6 52 146 - -
Lele05g2741 167 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Lele05g2741 167 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 144 IPR045899 -
Lele05g2741 167 SMART ring_2 98 139 IPR001841 -
Lele05g2741 167 MobiDBLite consensus disorder prediction 148 167 - -
Lele05g2741 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 146 IPR013083 -
Lele05g2741 167 Pfam Ring finger domain 97 140 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2741 Lele-ChrLele05 43233853 43234356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2741 56 154 C3H Transcription Factor Family AT5G06490 45.455 1.86e-24 92.4