Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2674 ATGTTCTGTCATTATTACGTGTATCAGTCAAATGTGCACTTCAAAACGGAGTTATCTAGTGGAAAACACATAACATCCATAAAAGTTGTCGCACACTGTTTGGTGTTGCTTTTTTCCCACTGTTTTGGACCCCAAGGCAAAACTATGGTGGTTTCCATGGATTTTGGTTCAGCTGCGAACTTGCATGCTCTTCTTCAATGCTTCAACCTGACTCTCACTATTCATCAACTTCATCCCATTTTGGCTTACCGTAACTCCAAAGCATCAATCAGTAAAGTTCATTTCAAAAGCAAACCCAAAGCCCTAACTAGCATCTATATTCACACACACACACACACACATATTGATCTCTCTCTACTGTTTGTATACATTCATCATCTCTCTGCAATGGATTCAGCTGCATCAATGGGGATGATGTGGGAGCAAAGTAGGGTTGCAGGGTTGAAGATGATGGTGAGGCTGTGCCTTGGAATGTCGGTGATGCTGTTTGTGGAGAGAGTGTATATGGGAATAGTGATAATGCTCGTCAAGCTGTTTGGACTGAGCAACCCTAAGAAGCGTTACAAGTGGGAGCCTCTTCAGCATGATGACGACGTTGCTGATCTTGAGCTTGGCAACTCCATTTACCCCATGGTTCTCGTTCAAATCCCAATGTACAATGAGATTGAGGTGTACAAGGTGTCGATAAGAGCAGCATGTGGGCTATCATGGCCGGCAGATAGGATCATCATTCAAGTTCTGGATGACTCCACTGATCCTCTCATCAAGGAAATGGTGGAGACGGAGTGCAAGAGATGGGAGAGCGAAGGGATAAACATAAAGTATGAGATCAGAGAGAACAGAAGAGGCTACAAAGCAGGAGCTCTCAAGCAAGGCATGAAGCATCCTTACGTCCATCTCTGTGATTATGTTGCCATCTTTGATGCTGACTTCCAACCTCATCCTCATTTCCTCCTCCAAACCCTTCCCTTCCTCATTCACAATCCTCGACTTGCTCTCGTCCAAGCTCGCTGGACTTTCGTAAATGCTGATGAATGCTTAATAACAAGAATGCAAGAAATGTCACTAGATTACCATTTCAAAGTTGAGCAAGAAGTTGGATCCTCTACCTACGCTTTCTTTGGTTTCAATGGCACAGCTGGTGTCTGGAGGCTTTCCGCATTGAACGAGGCTGGAGGATGGAAGGACAGAACCACTGTAGAAGACATGGACTTGGCTGTTCGAGCCGGTCTCAAGGGCTTCGAATTTTTGTACCTTGGCGATCTTCAGGTGAAAAATGAATTGCCAAGTACATTTAAAGCCTACCGTTATCAACAACACCGATGGTCTTGTGGGCCAGCTAATCTCTTTAGGAAAATGGCAATGGAAATCATAAGAAACAAGAAAGTGTCAATGTGGAAGAAGTTCTATGTGATCTATAGCTTTTTCTTTGTCAGGAAGATCGTAGCCCATGTAGTAACATTTTTGTTCTACTGTGTTGTTCTTCCTGCAACTGTTCTTGTTCCTGAAGTGGAAGTTCCAAAGTGGGGTGCTGTATATATACCTTCCATCATTACTCTGCTTAATGCTGTAGGAACTCCAAGATCACTCCACCTATTGGTATTCTGGGTCCTATTTGAAAATGTCATGTCAATGCATAGGACTAAGGCAACACTCATAGGTTTGCTGGAGGCAGGGAGGGTAAATGAATGGGTGGTCACTGAGAAATTGGGAGATGCTCTTAAAACAAAATCAGAAGGCAAAGCAACCAGGAAGCCACGTGTCACATTTGTTGAAAGAATCCATTTGCTGGAACTTGGCGTTGCGACCTACCTTTTCATCTGTGGATGCTATGACTTAGCCTTTGGGAAGAACCAGTACTTCATATACCTCTTCCTGCAAGCTCTTGCCTTCTTTATTGCAGGGGTTGGCTACATTGGTGTCTTTGTTTCCAATTCTTAG 1941 0.4374 MFCHYYVYQSNVHFKTELSSGKHITSIKVVAHCLVLLFSHCFGPQGKTMVVSMDFGSAANLHALLQCFNLTLTIHQLHPILAYRNSKASISKVHFKSKPKALTSIYIHTHTHTHIDLSLLFVYIHHLSAMDSAASMGMMWEQSRVAGLKMMVRLCLGMSVMLFVERVYMGIVIMLVKLFGLSNPKKRYKWEPLQHDDDVADLELGNSIYPMVLVQIPMYNEIEVYKVSIRAACGLSWPADRIIIQVLDDSTDPLIKEMVETECKRWESEGINIKYEIRENRRGYKAGALKQGMKHPYVHLCDYVAIFDADFQPHPHFLLQTLPFLIHNPRLALVQARWTFVNADECLITRMQEMSLDYHFKVEQEVGSSTYAFFGFNGTAGVWRLSALNEAGGWKDRTTVEDMDLAVRAGLKGFEFLYLGDLQVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIIRNKKVSMWKKFYVIYSFFFVRKIVAHVVTFLFYCVVLPATVLVPEVEVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWVLFENVMSMHRTKATLIGLLEAGRVNEWVVTEKLGDALKTKSEGKATRKPRVTFVERIHLLELGVATYLFICGCYDLAFGKNQYFIYLFLQALAFFIAGVGYIGVFVSNS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2674 646 Pfam Glycosyl transferase family group 2 303 494 IPR001173 -
Lele05g2674 646 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 133 640 - -
Lele05g2674 646 FunFam Glucomannan 4-beta-mannosyltransferase 9 201 429 - -
Lele05g2674 646 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 203 429 IPR029044 -
Lele05g2674 646 SUPERFAMILY Nucleotide-diphospho-sugar transferases 210 479 IPR029044 -
Lele05g2674 646 Coils Coil 642 646 - -
Lele05g2674 646 CDD CESA_CaSu_A2 210 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2674 Lele-ChrLele05 42644547 42649655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2674 131 645 Miscellaneous Gene Families AT5G03760 74.231 0.0 810
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2674 05 42644547 42649655 Lele13g1692 13 25537003 25557917 CCT
Lele05g2674 05 42644547 42649655 Lele14g1635 14 23940081 23943629 CCT
Lele05g2674 05 42644547 42649655 Lele15g0721 15 4164510 4168409 CCT
Lele05g2674 05 42644547 42649655 Lele16g0728 16 4104326 4108268 CCT
Lele05g2674 05 42644547 42649655 Lele05g2674 05 42644547 42649655 ECH
Lele05g2674 05 42644547 42649655 Lele07g2698 07 32491146 32498016 hybridization
Lele05g2674 05 42644547 42649655 Lele08g2600 08 31753170 31756673 hybridization