Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2670 ATGGCTACTGAGGACTTCCCTCTTATTGACTCCCCCTCGCACAACCCCCACTCGCAACCTCTCCTCCACGCTCACACGCGCCCCTTCCCTTCCTCCTCTAGCCCCACCACGGGAGTTGCAGCTACCTCCGCCGATGCCGGCGACTCCTCCAACGCCTACTTCACCCAACCCTTTCCCGACGATTGCGAAGATTCCTCTGATCTGAACAAATCCACGTCCGGAGCCTTGACCCCTAAGTCGAAGCGTACTGCAGTCGACAGCTCCTATTACTATAACAAGAAGTCGAAATCCTCCGCCGCCGGTGGCGGAGGCAGCATTGCTACGAGCGCTGAACCTGATTTAGGATCCGAAGCGACTTACCGGGTCGATTACCGGAAGGATCGCGAGGAATGGAGTGACACGGCGATTGAATGTCTCCTGGACGCTTACACAGAAAAACTGAACCAGCTGAATCGCGGAAATCTGCGCGGGCGCGATTGGGATGAGGTGGCGAGAGCCGTCAGCGAGCGGTGCTCCGTTGGTGGCAGTGCCGATGGAAAGAACAAATCGTATAAGAGTGTGGAGCAATGCAAGAACAAGATTGATAATTTGAAGAAGAGATACAAGGTGGAGCTTCAGAGGATAAGTAGCGGCAGCATCGCGTCGAGTAACTGGCACTGGTTTAAAAAGATTGAAGCTATTGTTGGGAATTCAGTGACTGTGAAGACGGTGTCAGATGATGAGAAGGCTGGTGGAGCTAATTCCTTGTCTGCTGCGAGACGCCCAAAGAACAGATATACACCTAACAATGTTTCAGTGTTGAATAACCCGAAAACAAAACCAGCATCTAATCTCAAATGGCATAGAGTTCTGTTTAAAATCAGTGGATCTGCTTTAGCTGGAAACTGCCAAAGTATTGACCCCAAGGTGGCAACTCAGATTGCTGAGGATGTGGCGACAGCTTGCCGCCTTGGTGTAGAGGTTGCCATTGTTGTTGGTGGTCGTAACTTTTTTTGTGGAGATTCCTGGGTGTCTGCTACTGGGTTGGACAGACCTACGGCTTACCAAATTGGTATGATGGCGACGGTTATGAATTCTATTCTGCTTCATTCTGCTTTGGAGAAACTGGGCATTCAGGCACGTATTCAAAGTGCATTCTCTGTGCCAGAGATTGCTGAACCTTATAGCAGGCAACGAGCTATCCGACATCTCGAGAAAGGAAGGGTTGTCATACTTGGTGGTGTTGGTGCTGGCACCGGAAATCCTCTCTTTACCACTGATACAGCTGCAGCTCTAAGAGCTTCCGAGCTTAATGCAGATGTTATGCTGAAAGGAACCAATGTTAGTGGGGCCTATGAATGCCATGCTGGCAGTGAGAATGTGACACCTGATCACATTTCTTTTCGGGAAGTTGCTTCGAGGGGCATCACTTCCATAGATATGATGTCATTAGCATACTGTGAAGAGAATGGAATTCCAGTTGTAGTCTTCAACATGCTTGAACAGGGGAATGTTTCAAGAGCACTATGTGGAGATCAAATTGGCACCTTGATTGATCAAACAGGAAGTATTAATTAA 1557 0.492 MATEDFPLIDSPSHNPHSQPLLHAHTRPFPSSSSPTTGVAATSADAGDSSNAYFTQPFPDDCEDSSDLNKSTSGALTPKSKRTAVDSSYYYNKKSKSSAAGGGGSIATSAEPDLGSEATYRVDYRKDREEWSDTAIECLLDAYTEKLNQLNRGNLRGRDWDEVARAVSERCSVGGSADGKNKSYKSVEQCKNKIDNLKKRYKVELQRISSGSIASSNWHWFKKIEAIVGNSVTVKTVSDDEKAGGANSLSAARRPKNRYTPNNVSVLNNPKTKPASNLKWHRVLFKISGSALAGNCQSIDPKVATQIAEDVATACRLGVEVAIVVGGRNFFCGDSWVSATGLDRPTAYQIGMMATVMNSILLHSALEKLGIQARIQSAFSVPEIAEPYSRQRAIRHLEKGRVVILGGVGAGTGNPLFTTDTAAALRASELNADVMLKGTNVSGAYECHAGSENVTPDHISFREVASRGITSIDMMSLAYCEENGIPVVVFNMLEQGNVSRALCGDQIGTLIDQTGSIN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2670 518 Gene3D - 131 203 - -
Lele05g2670 518 PANTHER URIDYLATE KINASE 124 517 - -
Lele05g2670 518 CDD AAK_UMPK-PyrH-Ec 282 512 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lele05g2670 518 FunFam Aspartate/glutamate/uridylate kinase family protein 131 203 - -
Lele05g2670 518 Coils Coil 180 207 - -
Lele05g2670 518 MobiDBLite consensus disorder prediction 241 271 - -
Lele05g2670 518 MobiDBLite consensus disorder prediction 1 81 - -
Lele05g2670 518 Gene3D - 271 517 IPR036393 -
Lele05g2670 518 FunFam Uridylate kinase isoform A 272 517 - -
Lele05g2670 518 MobiDBLite consensus disorder prediction 12 56 - -
Lele05g2670 518 SUPERFAMILY Carbamate kinase-like 279 511 IPR036393 -
Lele05g2670 518 MobiDBLite consensus disorder prediction 253 271 - -
Lele05g2670 518 Hamap Uridylate kinase [pyrH]. 278 512 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lele05g2670 518 Pfam Myb/SANT-like DNA-binding domain 128 227 IPR044822 -
Lele05g2670 518 Pfam Amino acid kinase family 282 491 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2670 Lele-ChrLele05 42614556 42617428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2670 131 238 Trihelix Transcription Factor Family AT3G14180 38.889 1.11e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele05g2670 AA_kinase 3.8e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2670 05 42614556 42617428 Lele07g2693 07 32462000 32464857 hybridization
Lele05g2670 05 42614556 42617428 Lele08g2596 08 31719565 31722589 hybridization