Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2669 ATGGCCGCTTCGAAGCCACGCAACACTCGATCAACGTCTCTTAGGGACGCCTTTGACTCTTCCAAGATGGAGGGCACAGGTACCTGGGATGCCCTCCAATGGACCAAGTTTCAGCCTGGTTCACGCTATGTTTCGCATGCCAATTTGGATTTCTTGCTGGAGGAAGAAAACGTCATAGCCCAGAGTATAAATGTATATATAGCCTCATGTCACCTGGAACTCTGCGTAAATACAGACTTGACATTTGCACCCTATCATTATGAAGCAGGACAGAACATGGGACATGGTGTTGTACTTATTAATTCAGATGATGCAGGCGCATTGATGGTCACAAATTTTCGTCTTATTTTCCTGGCTGTAAAGATGCAGTCAGCTAATCGTCAATCAGACAAGACACCCCCACAAAGACTGCTCCAGGTTATTGGAAAGGATATGAGAATTATCGTTTTTGGTTTCAGGCCTCGTACAAAACAGAGGCGTGTCATATTTGATGCGTTACTAAGAAGTACAAAGCCAGCTGTACTATGGGATCTTTATGCATTTGTATATGGCCCTTCTAGGTTTACTAACTCTAACCCAAAGGTGCGCCTACTAGATGAGTATTTCCGACTTCTTGGAAAATGCTTTTACCGTGCTTCAGTCAATATGATTGAAAGTGGGTCCTTTACCTTGTCGAATGACTTGTGGAGAATAAGTAAAGTGAACTCTAACTACAACGTGTGCCAGAGTTATCCTTTCGCTTTGATTGTACCGAAGACCATAAGTGATGATGAAGTGCAACAAGCTTCCACCTTTCGTGGTAGATGTCGGGTTCCTGTAGTTTCATGGTGCCACCCAGATACGGGAGCAGTTCTTGCACGTTCATCCCAACCTTTAGTTGGTCTCATGATGAATATGAGGAGCAATGCAGATGAAAAGCTCGTGGCTGGAATATGTGGCAAGCTTAGTGATGACTCACGCAGGAAGCTTTATATTGCTGATGCAAGACCGAGGAAGAATGCATTAGCTAATGGGGCCATGGGAGGTGGTTCAGAATCATCTTCAAATTACTTTCAGTGTGAGGTAGTTTTCTTTGGCATAGACAACATCCATGCAATGAGAGAAAGCTTTGCTCGGTTGAGAGAATACCTAGACACTCATGGCAAAGCATCATCAGATGGAATGTCATCTTTTTTGGATTCTTGCACTGGATTAAGTAACAATGGATTTACTCATTGCAGGATTGAAATTGAATCATTTATAGTTATGGTTGATGTCCGAAGGATATCTCTGGAACCTGACATATGCACAAATGTTTCTGATTTCTTCCATGAGCCATCCTTTTATGTGACTAAAATATTAATATGTTCTGAAAACGATGTGAATTCTAGACATGGTGGGTCAACATGGGGTGGAGGCAATCTAAGTAGTATGTCTACGTCAGTATCTACTCTTGGGGACAGTGGATGGCTACTACACGTTCAAAGCGTCTTAGCTGGTGCTGCTTGGATTGCTGCTCGCCTTGATATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGATGGCTGGGATAGAACAAGTCAGTTGGTTTCTCTTGCTAATTTGTTCCTTGATCCATACTATCGCACATTCCAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCACCCATTTTCTGATCGGATGGGAATGCCTTCGGTCTCTGGAAGTGGCAACGTGCCTTTTGAGTTGACTAGACAGTCTTCTACTGGAAGTTGCCCTTCACCACCCATGCGCCAGTCATCATTCACATCTCAGTCTTCCCCTTCTCATGCACAGACCTCAAACCACTACTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCACAACTGCTGCGGATGTATCCTTTTGCTTTTGAATTCTCCTCGGTACATAACACTCTTCCATGTCTGACTTTTCTTAGAGCAATTTTCTTTTCTGTGGAATGGCTAAGTGAGAAGGAAAGGCAGCAATGCAATGTTTTTGAAGCTTGTGGATGTTTGTGGGTATACTTGGCTGACTTGCGTGCTTCTGAAGGAAAATCTCATGTCCATTGTAATCTCTATTATGATCCATCGAAGTACAATGGTTCTATCTTTCCCCCAGCAGCAGCTTTAGCCCCAACACTTTGGCCCCAATTTCTTCTTCGCTGGGCTTGTCCAGAAGAAGCGCAAGCTGCTGTTGAAATTGAAGCAGAATCCAGAAAAATGTTTCTAAAATTCTCTGAGATGCAGAAGGCTAAAGAATTGGCAGAGGGGAAAGCCAAAGAAATTGAAATTGCCATGGAATCATTGAGTTCAGAATTACGTAACGAGAAACAGTTAAGATGGTCAGCTATGAACATGACCAAGAAAACAAGCAAACAGAATGTGGCCATAAAACGAGCAATTCAATCACTGGGATGCAAGTTTCACTTATCTGACAATGGCGATTGTGTTTTTGATATTGAAAGCAACTTAGTGGGGTCAGGGTCAGCACAAACTAGTATGTACCCTGCCACCAGAAAGGATTTGGATTGTACATCACATGATGACAAGAAGGATCTGTCTGTTTCAGTAGCAGTCACGGAGGAGGATGATCATGACGATCATGCAAACAATGCAATTGTTAGAGTATGTGAAGCTCTATGCCCACTTCGTACTCCAAATGGACGCTGCAGGTGGCCAAATGCCGGTTGTGCGCGACTAAGTTGTCAGTTTGTTGGTTTAAGGGCAAATTTTGATGCATTTGACCAATTGTCGATTGATGATAGTTACTTCAAATCTGAATGA 2784 0.4303 MAASKPRNTRSTSLRDAFDSSKMEGTGTWDALQWTKFQPGSRYVSHANLDFLLEEENVIAQSINVYIASCHLELCVNTDLTFAPYHYEAGQNMGHGVVLINSDDAGALMVTNFRLIFLAVKMQSANRQSDKTPPQRLLQVIGKDMRIIVFGFRPRTKQRRVIFDALLRSTKPAVLWDLYAFVYGPSRFTNSNPKVRLLDEYFRLLGKCFYRASVNMIESGSFTLSNDLWRISKVNSNYNVCQSYPFALIVPKTISDDEVQQASTFRGRCRVPVVSWCHPDTGAVLARSSQPLVGLMMNMRSNADEKLVAGICGKLSDDSRRKLYIADARPRKNALANGAMGGGSESSSNYFQCEVVFFGIDNIHAMRESFARLREYLDTHGKASSDGMSSFLDSCTGLSNNGFTHCRIEIESFIVMVDVRRISLEPDICTNVSDFFHEPSFYVTKILICSENDVNSRHGGSTWGGGNLSSMSTSVSTLGDSGWLLHVQSVLAGAAWIAARLDMEKASVLVHCSDGWDRTSQLVSLANLFLDPYYRTFQGFQALVEKDWLAFGHPFSDRMGMPSVSGSGNVPFELTRQSSTGSCPSPPMRQSSFTSQSSPSHAQTSNHYSPIFLQWVDCVSQLLRMYPFAFEFSSVHNTLPCLTFLRAIFFSVEWLSEKERQQCNVFEACGCLWVYLADLRASEGKSHVHCNLYYDPSKYNGSIFPPAAALAPTLWPQFLLRWACPEEAQAAVEIEAESRKMFLKFSEMQKAKELAEGKAKEIEIAMESLSSELRNEKQLRWSAMNMTKKTSKQNVAIKRAIQSLGCKFHLSDNGDCVFDIESNLVGSGSAQTSMYPATRKDLDCTSHDDKKDLSVSVAVTEEDDHDDHANNAIVRVCEALCPLRTPNGRCRWPNAGCARLSCQFVGLRANFDAFDQLSIDDSYFKSE 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2669 927 ProSiteProfiles Myotubularin phosphatase domain. 209 719 IPR010569 -
Lele05g2669 927 MobiDBLite consensus disorder prediction 576 603 - -
Lele05g2669 927 SUPERFAMILY PH domain-like 85 183 - -
Lele05g2669 927 MobiDBLite consensus disorder prediction 1 24 - -
Lele05g2669 927 MobiDBLite consensus disorder prediction 1 19 - -
Lele05g2669 927 PANTHER MYOTUBULARIN-RELATED 93 894 IPR030564 -
Lele05g2669 927 ProSitePatterns Tyrosine specific protein phosphatases active site. 510 520 IPR016130 GO:0016311|GO:0016791
Lele05g2669 927 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 469 723 IPR029021 -
Lele05g2669 927 Pfam Myotubularin-like phosphatase domain 178 634 IPR010569 -
Lele05g2669 927 Gene3D - 95 170 IPR011993 -
Lele05g2669 927 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 222 394 IPR029021 -
Lele05g2669 927 Coils Coil 752 779 - -
Lele05g2669 927 CDD PTP-MTM-like 269 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2669 Lele-ChrLele05 42602270 42613572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2669 457 927 Protein tyrosine phosphatase (PTP) family AT3G10550 57.082 4.85e-173 522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2669 05 42602270 42613572 Lele07g2692 07 32443429 32461019 hybridization
Lele05g2669 05 42602270 42613572 Lele08g2595 08 31702691 31718233 hybridization