Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2648 ATGGCGCAATCGACCCGAGATCTCATCAAGATGGTCGGAGGGCCATACTACAAGGTTCCATTGGGACGTAAAGACAGTCTCTCGTCGAACGCTTCAAAGGTCGACGCGGCCTTACCGAAGCCAGATTTCACCATGGACAAGATCATCGAGAAGTTTAAGTTGAAGAACTTCACGGTCCGAGAAATGGTGGCTCTCACCGGCGGCCACACCATCGGATTCACGCATTGCAAGGAGTTCGCTCACAGGATCTTCAGTTTCAGCAAAACGTCCCCGGTAGATCCGACGATGAACCAGAAACTGGTGGAAGGATTGAAGCAACTATGCGCGAACTACACGAAAGACCCGTCGATGTCGGCGTTCAACGACATGAGATCGCCGGGAAAGTTCGATAACGCGTATTACCAGAACGTGTTGCATGGATTAGGGCTTCTGAGCTCAGATTCGCTTCTGGGAAGAGATCCAAGGACGAAGCCGATCGTCGAGCAATACGCGAAAGATTCGAATGTGTTCTTTCAGGATTTCGCAATGGCCATGGAGAAGCTTGAGGTGGTCGGAGTGAAGACGGGGAAAGACGGTGAAACACCCGACAGAACTAGTACTGAAGCTAGTCTGTCTTCAAGACCTACAAGTGAAAGTGTAGTGAAGAACTACACAAAAGTTTATAACAATATCATGGACGATAATATACCTACCAATGGAGGAAGAGGCGGGCCTAATACTGAAGAAGGGCATGGGAACTATGTCCCACAAAATGAAGAGGCCCATCGAAGGCGCACTATTAAGGAATTAACTACTTCTAATGCTACCTTTATTCCTTTTAATAATGCTCTTCCTGATTTTACCACTGATTTTGAAATTAAAGGGCATTTACTTCACAATCTGCCCAAGTTTCATGGTACTGCAGGTGAAGACCCCTACTCTCACTTAAAGAGCCTCTTTATGGTATGTAGAAGCATGCAATCACCCGGAGCCAACATAGATGACGTCCAATGGAAGGTCTTCCACCTCACCTTAGAAGGAAAAGCCATGACTTGGTTCATGTCACTACCTAGGTACTCGCCTAATGCCTACCAATCATGGGAAAATTTGAAGAGTGCATTCCTGGAGAAATACTGCCCTTTATCTAGAATATCCGCCATGCAAAAAGAAATTTATGGGGCTAAGCAGGATGTGATGGAGTCATTCTATGACTACTGGAGCCGCTTCCAAGACATGATAGACAAATGTCCAAATCATCAAATTCCAGATGAATTTCTGATCCTATACTTCAGTAAAGGACTCTTGCCCCAGGATGCAAAAATTCTAAATGCTGCTGCAAAAGGCTCCATAGATGATATGTTCATTGAAGATGCGTGGGAGTTGATCAGAAAAATAGCAATAAATGAAGACCAATATGGTCTGTCTAACGCCAGAGCAGTACATGAGATGAGTACTGGACGAGACCCATTACTAGTCAAACTTGCCCATGACATGGAAATATTAACTAAACAGATAAGTAATGTAACCAAGCAAGGAAACTCATGTCAAACCCTAGTGGCTGCTAGTTGTAATCTCTGTAATTCATCTATACATATTACTGCTAATTGTCCATCTTGTCCAGAGAATGTTTCAGCCATGTATCAGGGACGAACAAGTCAATTCCAAAAAAGAGACCCCTTCTCTAACACATATAATGAAGGATGGAGAAATCACCCTAATCTCAGATATGGAGGCATAGATAACAGAACCATGCAAAATTGTTTTCAGGAAAGAGAGCCTTCTCAAGCAATTATGCCAATCCAAGACCTTTCTAACAAGAATGATGATATGACATTAGTTCTTAAAGGTATATCAGATCTCACCTCTGCTGTCACAGGAGTAACTTCTCAACTCTCAAACTTGTCATCCCGATTTGATATAGAGAAATCTAGTACGGATGCCAAACTTGACAAGCTAGCTTCGGGTTGTGCTACCTTAGATAGTAAGTATGATAATCTATCAACTTATGTGACTCAATTGGCTAACTCTATAAATAAGCAACAAGCAAAGAATGCAGGGACCATCCCCTCCAATACTGTCATTAATCCTAGATCCTTAAATGGCATCACACTGAAAGGTGGCAAAAAGGTAGGATTCTTAGAAAATGATGATGTGACAAACACTACTGAGGATATCATTGAAGATACTATTAAACATATCTATGAGCATATCACTAAAGGTGTGGAAGACATTACTGAACACATCCCTGAAGTTCCTAAGCAATCAACAAGTCTGAAAGAGAAAGAACTACTCAAGAAAGATGAGGCTACTCAAGTAGAGACTGCCACAACCATCAGTAAAGAGGTAAGTATTCCTTTCCCTAAATCTTATGCAATGAGTAAGAGAACTGCTAATAAAGAACAGGACAAGGAGATTTATGACTTGTTTAGCAAACTTGAGGTAAATATTCCATTGTTAGAATTACTTAAAGGCATGCCTATAGTTGCTAAATTTATCAAAGACCTGTGTACACATAAACGTAGATTTAGACCAAATGAAAGAGTCCAAGTTTCTTCTAATGTCTCTGCCCTCTTTAAACCTCAACTTCCAATCAAATGCCAAGATCCAGGGGCTTTTACAATTCCTTGTACTATTGGGAAAATACATATTAATAAGGCATTATTAGATCAAGGAGCAGCTATTAATGTTATGCCTACTTCCATTTATGCTTTACTTGGAACGAAAAGTATTAAACCCACAAGCATAGTGTTGCAGCTAGCTGACAGAACTATGAGGCGTCCAAATGGCATTTTAGAAGATGTTCTTGTGCAGGTTAAGGGGCTAATCTTTCCTGCAGACTTTTATGTACTAGACATGTGCAGTGAGGTATCACGTCAAGATTCTACCATCATCCTGGGAAGGCCTTTCCTAAGAACTGCATGCACTGTTACCAACATGAAGGAAGGAACCATCACCATGGAAATAGGGGAGGACAAGATAACCTTCAACATGTATGAAGCGATGAAACACCCGTATGAAGATTACTCTCTATTGGGTGTAAATGCCATAGACTTAACTATCGAAGAAGTAACAGAAGAACACGAACTAAATTGCCACGAACCACCTACTAATATGTATCTATCTACTTATACCATTTGTACTTATGATAGAGAAATCGGTTGTTCTATTTGTTTAAAAGAAGCTAACGATTGTCCCTCTTTTTCACACGATTCCATGCCTGACATCTCCAAAGAGGAGCTACTTTCTATTCTTGTAGGTATCCAACGCACGATAAGAACTGAAGACATGAGTATCTCACCCTCACCACGAGCTACTTTATCATCTCATTCCTTCAAGTTGCATAAATCAGACAAAGAAGAAGACACAGAAGATATCTTGTCTCAGCATAAAGAAGAAGAAGCTACCAAACTCTCTAATGTTTTGACACAACTTGACACAATAATTGCCAGCATTGACCAAGAAAAAGGGAATGCTCTTAATTCTGCAGAAATATCCAAATTGATTCCTTCTATTGTCCAACCACCTGTTCTAGAATTGAAACCTCTTCCCTCTAATCTGAAGTATATTTTTCTTGAATTAAATGAGAAGTTGCCTGTGATTATTTCTAACACCTTATCTTCAGAGCAAGAAGAGAAGCTATTATCTGTTCTTCAAAAGAATAGAGCTGCTATAGGATGGACACTAGATGTTGTAAAAAGGGAAGTCACTAAACTTCTTTCTGCAGGTATTATCTATCCGATATCAGATAGCGAATGGGTAAGCCCTGTACAGGTTGTTCCTAAGAAAAGTGGGATCACTGTTGTTAAGAATGACAATAATGAATTGATTCCCACTAGAGTACAAAACTCCTGGCGTGTTTGTATTGACTACAGAAAATTGAATGAGTCCACTAGGAAAGATCACTTCCCCCTTCCTTTTATTGATCAAATGCTTGAGCGTTTAGCAGGGAAGTCCCATTATTGTTTTCTAGACGGTTTTTCAGGTTATTTTCAAATTCCTATTGCACCAGAGGACCAGGAAAAGACTACCTTCACTTGCCCTTTTGGAACATATGCTTACAAAAGGATGCCATTCGGGCTCTGTAATGCCCCGGGCACATTTCAACGCTGTATGATGAGTATATTTTCTGATTTTCTTGAGCAGTGTATGGATGTATTTATGGATGATTTTACAGTCTATGGTGAGTCATTTGATACTTGTCTAGATAGTTTAGATAAAGTTCTTGCTAAGTGCATTGATAAGAAATTAGTCCTTAATTTTGAAAAATGTCATTTTATGGTTAATCAGGGAATTGTCCTAGGACACTTAATATCTGGTAAAGGAATCGAGGTCGATAAAGCTAAAATTGAAATAATATCTACCTTACCCTATCCAACCAACTTAAAAGAACTTAGGTCCTTCTTAGGCCATGCTGGATTCTATAGGAGATTTATTAAAGATTTTAGCAGAATTGCCTTACCATTATCTAAACTCTTGCAGAAGGATGTTGAATTTATTTTTGATGATAAATGCATACACGCTTTTAACAAACTCAAGGACAGTCTCACATCCCCTCCTATTTTAACTGCACCTGATTGGAATTTACCTTTTGAGCTTTCCTGTGATGCTTCTAATAGTGCAGTTGGTGCCATGCTTGGACAGAAGGAAGATAAGGTTTCAAGGGTCATTGCTTATGCATCAAAGACCTTAGATACAACACAAGAGAACTACACAACTACTGAGAAGGAATTATATGCTATTGTTTTTGCTTTAGATAAGTTTAGACAATATCTCATAAACTCCAAAGTTGTTATTTTTACAGATCATGCAGCAGTAAGGTATCTTTTCAAGAAACCTCAATCTAAACCAAGGTTATTGCGATGGATGCTCCTTATACAAGAATTTGATATTGAGATCAAAGATCGAGCAGGAGCTGAGAATAATGTAGCTGACCACCTAAGTAGGCTTCCCGATGAAGCAAGGGGAGTGGATAATTCTAATTTAGTTTGTGATGATTTTCCTGATGCTACCCTCTTTGCTTTATCTTTGAAGGAACCATGGTATGCACACTTAGTGAATTATCTAGTGGCAGGTGTAATCCCCCATTCTATGTCTCCTTTTCAGGTACAGAAGCTGAAGAGGGAATCTAGGTACTACATGTGGGATGATCCACTCCTTTGGAGGATATGCAATGATCAAGTAATCAGGAGGTGTATCCCAGAGGATGAGTTTGATGCTATCCTGACAGCTTCTCATTCTGCAGTCTGTGGAGGTCACTTTAGTGCTAAGAAGACCTCTAGAAAAATCCTAGAAGCAGGTTTCTACTGGCCATCCTTATTCAAGGATGCTTTTTCCTTCTGCAAAGTGTGTGATAAGTGCCAAAGGTTTGGTGGTTTGAGTAAGAGGAATGAGATGCCACAACAACCCATTCTATTTTGTGAAATTTTTGATGTATGGGGAATTGACTTTATGGGGCCTTTCCCTCCTTCATTTGGTTTCTCTTATATCCTTTTAGCTGTTGACTATCTATCTAGGTGGGTGGAAGCAATCCCTACAAGGAAGGATGATGCTCAGACAGTCTCTAAATTTATTAAATCTAATATCTTCTGTAGGTTTGGAACACCAAGAGCTATAATAAGTGATAGAGGAAGCCACTTCTGCAACAAGATTCTAGTTAAGCTCTTTGCTAAATTTGGGGTCACACACAAGATTGCCACTGCTTATCATCCACAAACAAATGGTCAAGCAGAAGTCTCAAATCGAGAAGTAAAGCATATCTTAGAGAAGACTGTGCATCCCAACAAGAAAGATTGGAGCTTACGACTTGAGGAAGCACTTTGGGCATATAGGACAGCCTTCAAGACACCTATAGGGATGTCGCCATATAGGATTGTATTTGGTAAGCCATGTCATCTCCCTGTAGAACTTGATCATAAGGCTTATTGGGCTATCAAGATGTGCAATATAGATATGGAAGCTTCAGGATTAGAAAGAATGCTACAGCTGGAGGAATTGGATGAGATAAGGCGAGATGCATATGAAAACTCTTGCATCTATAAAGAGAAAACAAGATTGCTCCATGACAAAGGCATTTTAAGGAAGCAGTTTCAAGTAGGGGATAAAGTGTTGATATTTGCAGCTAGATTCAAGTTAAAACCTGGCAAGTTCACTACCAAGTGGGAAGGACCTTTCACTGTTATCAAAAACCACAAGTTTGGAATGATAGAGCTCATAGACAATGCCACTGGACTGACAAGAAAGATAAATGGTCATCTTTTGAAGCTTTACCATGAGAGCACACAACCCCCTTGA 6270 0.3992 MAQSTRDLIKMVGGPYYKVPLGRKDSLSSNASKVDAALPKPDFTMDKIIEKFKLKNFTVREMVALTGGHTIGFTHCKEFAHRIFSFSKTSPVDPTMNQKLVEGLKQLCANYTKDPSMSAFNDMRSPGKFDNAYYQNVLHGLGLLSSDSLLGRDPRTKPIVEQYAKDSNVFFQDFAMAMEKLEVVGVKTGKDGETPDRTSTEASLSSRPTSESVVKNYTKVYNNIMDDNIPTNGGRGGPNTEEGHGNYVPQNEEAHRRRTIKELTTSNATFIPFNNALPDFTTDFEIKGHLLHNLPKFHGTAGEDPYSHLKSLFMVCRSMQSPGANIDDVQWKVFHLTLEGKAMTWFMSLPRYSPNAYQSWENLKSAFLEKYCPLSRISAMQKEIYGAKQDVMESFYDYWSRFQDMIDKCPNHQIPDEFLILYFSKGLLPQDAKILNAAAKGSIDDMFIEDAWELIRKIAINEDQYGLSNARAVHEMSTGRDPLLVKLAHDMEILTKQISNVTKQGNSCQTLVAASCNLCNSSIHITANCPSCPENVSAMYQGRTSQFQKRDPFSNTYNEGWRNHPNLRYGGIDNRTMQNCFQEREPSQAIMPIQDLSNKNDDMTLVLKGISDLTSAVTGVTSQLSNLSSRFDIEKSSTDAKLDKLASGCATLDSKYDNLSTYVTQLANSINKQQAKNAGTIPSNTVINPRSLNGITLKGGKKVGFLENDDVTNTTEDIIEDTIKHIYEHITKGVEDITEHIPEVPKQSTSLKEKELLKKDEATQVETATTISKEVSIPFPKSYAMSKRTANKEQDKEIYDLFSKLEVNIPLLELLKGMPIVAKFIKDLCTHKRRFRPNERVQVSSNVSALFKPQLPIKCQDPGAFTIPCTIGKIHINKALLDQGAAINVMPTSIYALLGTKSIKPTSIVLQLADRTMRRPNGILEDVLVQVKGLIFPADFYVLDMCSEVSRQDSTIILGRPFLRTACTVTNMKEGTITMEIGEDKITFNMYEAMKHPYEDYSLLGVNAIDLTIEEVTEEHELNCHEPPTNMYLSTYTICTYDREIGCSICLKEANDCPSFSHDSMPDISKEELLSILVGIQRTIRTEDMSISPSPRATLSSHSFKLHKSDKEEDTEDILSQHKEEEATKLSNVLTQLDTIIASIDQEKGNALNSAEISKLIPSIVQPPVLELKPLPSNLKYIFLELNEKLPVIISNTLSSEQEEKLLSVLQKNRAAIGWTLDVVKREVTKLLSAGIIYPISDSEWVSPVQVVPKKSGITVVKNDNNELIPTRVQNSWRVCIDYRKLNESTRKDHFPLPFIDQMLERLAGKSHYCFLDGFSGYFQIPIAPEDQEKTTFTCPFGTYAYKRMPFGLCNAPGTFQRCMMSIFSDFLEQCMDVFMDDFTVYGESFDTCLDSLDKVLAKCIDKKLVLNFEKCHFMVNQGIVLGHLISGKGIEVDKAKIEIISTLPYPTNLKELRSFLGHAGFYRRFIKDFSRIALPLSKLLQKDVEFIFDDKCIHAFNKLKDSLTSPPILTAPDWNLPFELSCDASNSAVGAMLGQKEDKVSRVIAYASKTLDTTQENYTTTEKELYAIVFALDKFRQYLINSKVVIFTDHAAVRYLFKKPQSKPRLLRWMLLIQEFDIEIKDRAGAENNVADHLSRLPDEARGVDNSNLVCDDFPDATLFALSLKEPWYAHLVNYLVAGVIPHSMSPFQVQKLKRESRYYMWDDPLLWRICNDQVIRRCIPEDEFDAILTASHSAVCGGHFSAKKTSRKILEAGFYWPSLFKDAFSFCKVCDKCQRFGGLSKRNEMPQQPILFCEIFDVWGIDFMGPFPPSFGFSYILLAVDYLSRWVEAIPTRKDDAQTVSKFIKSNIFCRFGTPRAIISDRGSHFCNKILVKLFAKFGVTHKIATAYHPQTNGQAEVSNREVKHILEKTVHPNKKDWSLRLEEALWAYRTAFKTPIGMSPYRIVFGKPCHLPVELDHKAYWAIKMCNIDMEASGLERMLQLEELDEIRRDAYENSCIYKEKTRLLHDKGILRKQFQVGDKVLIFAARFKLKPGKFTTKWEGPFTVIKNHKFGMIELIDNATGLTRKINGHLLKLYHESTQPP 2089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2648 2089 MobiDBLite consensus disorder prediction 188 211 - -
Lele05g2648 2089 MobiDBLite consensus disorder prediction 1091 1118 - -
Lele05g2648 2089 FunFam Transposon Tf2-6 polyprotein-like Protein 1440 1529 - -
Lele05g2648 2089 Pfam RNase H-like domain found in reverse transcriptase 1518 1621 IPR041373 -
Lele05g2648 2089 Gene3D - 1690 1781 - -
Lele05g2648 2089 Pfam Integrase zinc binding domain 1725 1782 IPR041588 -
Lele05g2648 2089 CDD RNase_HI_RT_Ty3 1524 1643 - -
Lele05g2648 2089 ProSiteProfiles Plant heme peroxidase family profile. 1 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 Gene3D - 2 193 - -
Lele05g2648 2089 Pfam Peroxidase 4 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 SUPERFAMILY Ribonuclease H-like 1800 1949 IPR012337 -
Lele05g2648 2089 FunFam Peroxidase 39 181 - -
Lele05g2648 2089 PRINTS Haem peroxidase superfamily signature 13 25 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 PRINTS Haem peroxidase superfamily signature 122 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 PRINTS Haem peroxidase superfamily signature 61 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 MobiDBLite consensus disorder prediction 225 253 - -
Lele05g2648 2089 MobiDBLite consensus disorder prediction 1103 1118 - -
Lele05g2648 2089 Pfam Integrase core domain 1803 1896 IPR001584 GO:0015074
Lele05g2648 2089 ProSiteProfiles Integrase catalytic domain profile. 1791 1955 IPR001584 GO:0015074
Lele05g2648 2089 Gene3D - 1295 1430 IPR043128 -
Lele05g2648 2089 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 1274 1427 IPR000477 -
Lele05g2648 2089 PRINTS Plant peroxidase signature 60 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 PRINTS Plant peroxidase signature 13 28 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 PRINTS Plant peroxidase signature 136 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 PRINTS Plant peroxidase signature 120 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 PRINTS Plant peroxidase signature 176 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 SUPERFAMILY Heme-dependent peroxidases 4 194 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele05g2648 2089 CDD retropepsin_like 867 964 - -
Lele05g2648 2089 Gene3D Peroxidase, domain 2 39 181 - -
Lele05g2648 2089 SUPERFAMILY DNA/RNA polymerases 1220 1625 IPR043502 -
Lele05g2648 2089 Pfam Retrotransposon gag protein 332 427 IPR005162 -
Lele05g2648 2089 Gene3D Acid Proteases 844 992 IPR021109 -
Lele05g2648 2089 Gene3D HIV Type 1 Reverse Transcriptase, subunit A, domain 1 1222 1355 - -
Lele05g2648 2089 Gene3D - 1439 1531 IPR043128 -
Lele05g2648 2089 CDD RT_LTR 1235 1430 - -
Lele05g2648 2089 ProSitePatterns Peroxidases proximal heme-ligand signature. 61 71 IPR019793 -
Lele05g2648 2089 Gene3D - 1799 2003 IPR036397 GO:0003676
Lele05g2648 2089 PANTHER TRANSPOSON TY3-I GAG-POL POLYPROTEIN 1202 1624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2648 Lele-ChrLele05 42372035 42381816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2648 1 197 Peroxidase AT4G17690 52.792 2.26e-61 212