Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2646 ATGTCATCATCAGGAGAGGAACTTGCTTGGTCCGTCATTGAAGAAGAATCAAGCAAATCTCTTGTTTTATTTGATGAAAGGAGTGGCTTTGATTCAAGAACTGGGGTATTTCACTCTCTTGCTAAGCTTACTGCTAAGCATGAAATCCCCACAAGGCCAGATCTTGACACCGCAACTCTGGTTCTATCACACTTCCCTCATGCACATCAGCTGTCTGCTAAAAAGCCTGCCTTCATTGATTCTTCTACTGGCCAAACTATAAGCTATGGTGAACTTCAAGGCTCTATTTACTCCCTTGCTTCTGGTTTATACCATGGAATTGGGATCCGAAAAGGCGATGTGGTGTTGGTTCTAGCACCGAATTCAATTTTGTACCCAACTATGTGCCTTGCTGTGTTATCAATAGGAGCTATTCTTACCACAGCAAATCCTCTTAACACAGCTTCAGAAATAGCCAAGCAAGTAAAAGATTCAGGTGCTAAACTGGCCATTTCAGCACCTGAGGAGATGAAGAAACTTGTACCAACTGGGGTTCCTATAATTCTCACCACTCGTCAATCTGATGATCGAATGGTTTCAGTTGAAGAGTTAATAGAAGGCTGCTCTGATAATAATCCACAAGAGCTGCCTCAAGTTCAATTGGCTCAATCAGATACAGCAGCTATATTATACTCTTCAGGTACCACTGGGATGAGCAAAGGTGTCGTTTTGACACATGCTAATATCATATCCATCATAAGTTTACTAACTTGGTCTGCAGATGTAACTTCATCCCAAAATGATGTGTTTTTGGGATTCATCCCAATATTTCACATTTATGGGTTGATGTTCTTTGGATTGGGGTTGTTGTGTAGGGGTGTTACATCAGTTATAATGCAGAAATTTGACTTCAAAGAAGTGCTTTTTGCAATTCAGAAGTACAGAGTCAATAACTTACCAGCAGTGCCTCCTGTGATTCTTGCTCTTGTGAAATATGGAAGCAAAGCTGGGGTTGACTTGTCAAGCCTTACAAAAGTAGGTTCAGGTGCTGCACCTTTGAGTAAGGAACTAACTGAGGAATTTAGAAAGATGTTTCCTTGGGTTGAGCTAAGGCAAGGCTATGGACTAACAGAAACTTGTGGTGGAGCAACATTTTTCGTGTTTGATAAAGATGCTAAAGCTCGGCCCAGCTCGAGTGGGAGGCTACTTCCAACTTTCTGTGCAAAAGTTGTGGATGCTGAAACAGGGAAGGCTTTGCCCCCAGGAAAGGAAGGGGAGTTATGGCTTAAAAGTCGTACAATAATGAAAGAATATCTGGGAAATATGGAAGCAACATCTGCTACACTTGATTCAGAAGGGTGGTTGAAAACAGGTGATCTTTCTTATGTTGATGAGGATGGATTTGTCTATGTCCTTGAACGAATCAAGGAGCTGATCAAACATAATGGGTATCAGGTTGCTCCTGCAGAACTGGAAGCTCTGCTGCTCAGCCATCCCAATATTGTTGATGCAGCTGTTATACCGGTTGAAGATGTAGAAACAGGACAGATACCAATGGCGTATGTGGTGAAAGCAGCTGGTTCTGACATCACAGAAGACCAAGTCATTCAATTTGTAGCCTGCCAGGTGGCTCCATATAAGAAAATAAGAATGGTAAGCTTCATTGATGTTATTCCAAGGTCAGCTGCAGGTAAAATCTTGCGCAAGGATCTTGTTTCACACAGCAAAATTAAACTTGTTTCCAAGTTATGA 1731 0.4183 MSSSGEELAWSVIEEESSKSLVLFDERSGFDSRTGVFHSLAKLTAKHEIPTRPDLDTATLVLSHFPHAHQLSAKKPAFIDSSTGQTISYGELQGSIYSLASGLYHGIGIRKGDVVLVLAPNSILYPTMCLAVLSIGAILTTANPLNTASEIAKQVKDSGAKLAISAPEEMKKLVPTGVPIILTTRQSDDRMVSVEELIEGCSDNNPQELPQVQLAQSDTAAILYSSGTTGMSKGVVLTHANIISIISLLTWSADVTSSQNDVFLGFIPIFHIYGLMFFGLGLLCRGVTSVIMQKFDFKEVLFAIQKYRVNNLPAVPPVILALVKYGSKAGVDLSSLTKVGSGAAPLSKELTEEFRKMFPWVELRQGYGLTETCGGATFFVFDKDAKARPSSSGRLLPTFCAKVVDAETGKALPPGKEGELWLKSRTIMKEYLGNMEATSATLDSEGWLKTGDLSYVDEDGFVYVLERIKELIKHNGYQVAPAELEALLLSHPNIVDAAVIPVEDVETGQIPMAYVVKAAGSDITEDQVIQFVACQVAPYKKIRMVSFIDVIPRSAAGKILRKDLVSHSKIKLVSKL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2646 576 Gene3D - 45 469 IPR042099 -
Lele05g2646 576 Pfam AMP-binding enzyme C-terminal domain 483 558 IPR025110 -
Lele05g2646 576 FunFam Long-chain-fatty-acid--CoA ligase FadD 46 469 - -
Lele05g2646 576 Pfam AMP-binding enzyme 72 473 IPR000873 -
Lele05g2646 576 CDD 4CL 49 564 - -
Lele05g2646 576 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 32 566 - -
Lele05g2646 576 FunFam 4-coumarate--CoA ligase 2 470 570 - -
Lele05g2646 576 Gene3D - 470 571 IPR045851 -
Lele05g2646 576 SUPERFAMILY Acetyl-CoA synthetase-like 60 566 - -
Lele05g2646 576 ProSitePatterns Putative AMP-binding domain signature. 222 233 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2646 Lele-ChrLele05 42358965 42362133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2646 19 572 Monolignol Biosynthesis Gene Families AT1G20500 44.227 7.95e-157 458