Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2644 ATGGGTAGTGATTCTGCGACTTCTCTCGCCCCCGGATTCCGATTCCACCCAACCGACGAGGAACTCGTTCGCTTCTACCTCAGGCGCAAGGTGTGCGGCAAATCCTTCCGGTTCGACCCAATTGCCGTCGTCGACATCTATAAATCCGAACCCTGGGACCTCCCCTGTCAGTCGAAGCTGAAAAGTAGGGACTTGGAATGGTACTTCTTCAGTGGGCTGGACAAGAAGTACGGGAATGGGTCGAAGACAAATCGGGCTACGGAGAAAGGGTACTGGAAGACTACGGGGAAGGATCGCCCTGTGCGACACAACTCAGGAATTGTCGGAATGAAGAAGACCCTGGTTTATCATAGTGGTCGAGCGCCCCGCGGTGCTCGTACCAATTGGGTCATGCATGAGTACAGAATGGCCGATGAAGAATTGGTGAAAGCAGGAATAGCTCAGGATGCTTTTGTGTTGTGTAGGGTTTTCCAGAAGAGCGGTACTGGCCCAAAGAATGGAGAGCAGTACGGTGCCCCCTTCATAGAGCAGGAATGGGAAGAGGATGAGGTGGCTCCAGTGTCAGGTGAAGGGGCTGTGACTGATGAAGTTTTAATGGGTGATGATGTTGATGCTTTTGTTGAAACAAACGACCTTGAGCAGAACCTTAATACGGACATAGCATCTGCCAGTGCTGCTCTTCCACCTAACATGTGTTATGGGGAGAGTAGTAGCTATCTTAAACCTGAACACTCCCAGGAAGCCACTGAAGAACATAAGCCCTTGGTAAGCACTGGTGGAACTTGTGAGCCTCCAGAGGATCGGTTCCTGAGTATACCTGAGCAGTTTGCAGTGGATGGTAAAACATCTAAGGATGAATATAAAGCAGAAGCAAGGCATGATGGAAGTCATGATAATGTGGATAATGTATTTGATGATCTATACTTGGATGGAATTGATTTTCCTCAGATTGGTGATAGTTCATTCCTGGAAACCAATGATCTTTTGAATCCCATTGAGGCAGATCTTGACGTCAAGGACATGCTGGATGAGTATCTTAACTACTTAGATGCTGATGATGATATTTCCAACTTTATATCTTTTGACTCTCCTCTGATTAGGAGCGATGTAGAATCAATTCCTTTCATTCAGAATGTGGATGAGGAACCCAAGATGACGTGTAAGCAGAATTTTGAAGAAGCACCTTCTAGCAATGGAGCTTCCTCTTCTAAGCAGAATCCAGAATTGTCAAAATCAGTATCAGGAGATACGAATCCATGGACAAAAAGGGCCAGTCGCTTGTTGGGCGGCATCCCTGCTCCTCCTGCCTTTGCTTCAGAGCTTCCTCCCAAAGATATTGCTCTTCGGCTTCATTCTGTTGGTCAATCTTCCCAGAATGTAACTGCAGGTATGATTAGAGTAACTAACGTTACTCTTATAGGTAACGGGATGGACTGGACGCAGGGCAAGAATGGAGGGTTCAACTTCTTGATGTCTTCCGATTTTTCCCAACCTAATAATATTTCTGATCCGTTGGTCCCAGTTTCTAGCAAGAGTGCCTTTTTGGTGTCACATTGCTGTTTTTTCTTGATGCTCTTTTCGGTTCTCATTCTTTCACTGAGTTGCAAGATTGGGAGTTGCATGTATGCTGCTGGTAAATGA 1641 0.4637 MGSDSATSLAPGFRFHPTDEELVRFYLRRKVCGKSFRFDPIAVVDIYKSEPWDLPCQSKLKSRDLEWYFFSGLDKKYGNGSKTNRATEKGYWKTTGKDRPVRHNSGIVGMKKTLVYHSGRAPRGARTNWVMHEYRMADEELVKAGIAQDAFVLCRVFQKSGTGPKNGEQYGAPFIEQEWEEDEVAPVSGEGAVTDEVLMGDDVDAFVETNDLEQNLNTDIASASAALPPNMCYGESSSYLKPEHSQEATEEHKPLVSTGGTCEPPEDRFLSIPEQFAVDGKTSKDEYKAEARHDGSHDNVDNVFDDLYLDGIDFPQIGDSSFLETNDLLNPIEADLDVKDMLDEYLNYLDADDDISNFISFDSPLIRSDVESIPFIQNVDEEPKMTCKQNFEEAPSSNGASSSKQNPELSKSVSGDTNPWTKRASRLLGGIPAPPAFASELPPKDIALRLHSVGQSSQNVTAGMIRVTNVTLIGNGMDWTQGKNGGFNFLMSSDFSQPNNISDPLVPVSSKSAFLVSHCCFFLMLFSVLILSLSCKIGSCMYAAGK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2644 546 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Lele05g2644 546 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Lele05g2644 546 MobiDBLite consensus disorder prediction 391 418 - -
Lele05g2644 546 MobiDBLite consensus disorder prediction 243 262 - -
Lele05g2644 546 FunFam Nac domain-containing protein 86 18 162 - -
Lele05g2644 546 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Lele05g2644 546 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lele05g2644 546 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2644 Lele-ChrLele05 42346576 42349421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2644 1 543 NAC Transcription Factor Family AT5G04410 44.710 1.58e-145 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele05g2644 NAM 1.4e-35 No_clan