Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2638 ATGCTTCCTCCTATTACCTGTATTCTCTTCTTCTTATGTATCTTCATCAGTTCTTTCTCTTCTTCCGTTAAAGCTTCCTTCTTCAACCTCACCTTGCCCCACCAGCATGCTTACCCTGAAGCGGTGGTTCATGAAGTTCACAGGAGAGTCAATGTATCTCTTGCCCGGCGGGAACTACTCGCCGGCTCCGGAAAGGACCTCAGTAATGGCTGTCTCACCGGAAATCCAGTTGACGACTGCTGGCGATGCGACCCTAACTGGGCAGCAAACCGGCAGAAGCTCGCGGACTGTGGCATTGGGTTTGGCCGTGACGCCATGGGCGGAAAAGGCGGCCGGATCTACGTCGTCACTGACTCATCCGACTCCGACCCGGCTAATCCAACTCCGGGGACTCTTCGTTTCGGATGGGAGATGTATGCGATCGGCGGTAGTGCAAACCCCACCATCAACAGCCAAGGTAACCGTTATACGGCGCCGCCCAGTCCTGATGCAAAAGAGGTGACGAAGCGCGTGGACACAGACGAGAGGGAGTGGGCGGATTGGAACTGGAGGACAGAGGGTGACGTCATGGTGAACGGCGCCTTCTTTGTCCCGTCCGGCGGTGGCTTCAGCCCTCAGTATGCCAGAGCCTCCAGCGTCGACCCCAAGTCCGCCGTCCAGATCGACCAGCTCACCGGCAACGCCGGCGTGTTCGGCGATCCCAGGTACTATTCCTTCTCTCTCTCACATATCCAATAG 738 0.5678 MLPPITCILFFLCIFISSFSSSVKASFFNLTLPHQHAYPEAVVHEVHRRVNVSLARRELLAGSGKDLSNGCLTGNPVDDCWRCDPNWAANRQKLADCGIGFGRDAMGGKGGRIYVVTDSSDSDPANPTPGTLRFGWEMYAIGGSANPTINSQGNRYTAPPSPDAKEVTKRVDTDEREWADWNWRTEGDVMVNGAFFVPSGGGFSPQYARASSVDPKSAVQIDQLTGNAGVFGDPRYYSFSLSHIQ 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2638 245 SUPERFAMILY Pectin lyase-like 75 133 IPR011050 -
Lele05g2638 245 Gene3D - 74 134 IPR012334 -
Lele05g2638 245 Gene3D - 135 232 IPR012334 -
Lele05g2638 245 PANTHER PECTATE LYASE 18-RELATED 136 231 IPR045032 GO:0030570
Lele05g2638 245 PRINTS Pollen allergen Amb family signature 121 146 IPR018082 -
Lele05g2638 245 PRINTS Pollen allergen Amb family signature 97 114 IPR018082 -
Lele05g2638 245 SUPERFAMILY Pectin lyase-like 134 230 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2638 Lele-ChrLele05 42278596 42280647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2638 136 235 Polysaccharide Lyase AT3G54920 73.267 6.01e-45 155