Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2618 ATGATGTCTTATCGGAAGAAATGGTACTGGGAAAACAACATTCCTCAGCATATGGCTATGCATGCTATTGATGGTATACCAATTAGTTGTCAGATATTGCATGTGAAACAAGAGACTTTTACTCCTTTGAGTCACAACCACGTGAGTTTTTCATTCTTTGTTCAAAGTGGAAATTTGAACTTTCGCTTCCCATTTTGCGATAAGAGTATCCTCGAAGAGTACGTAGAATCAGGGACTTTGACTAGAGCATATAGGAGGAGTAAGATGTTGAATAACTCTGTCTCAGATAACAGTTTTTACATCGAAAGTGATGAAGAAGATGTAGAAAAGGAGCTTAACAAAGGAGAAGCTGATACTGATGCTGATGGGAACTATTCAGATTCTTCGAATTTTTCAAATGAAAACCAGCAGCCGAACATGCCCGGTTCGTACAACGTCTCATGGCCTCAGAGTTACAGGCAGTCAATTGATCTATACAGTAGTGTACCATCACCAAATATCGGATTTCTGGGCACTCCCTCACTGTCCAGATTAAGTAGCTCCTTTCTTTCTACATCTCTAACAAGAAGGCACACTCCTGAATCGCTACCTTCTGCAAAGCCCCTGTTACAACATACAGCAGATGAGCCACAGAGACGAAGCTCTCATACTTTGCTTCCTCCTATTCCTTCTAGGAGGCCGTCTATGTTTAAGAAGGATGCTGCTGCCAAGGTTTCTCATGAAGTCCCAATTCCTCGCCAGTGCTCTTATGGACAAGCTGTGCTTAATGGCATAAATGTCCTTTGTGGTGTAGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGTGGATGGCTTGGGCTTTCTATTTTATTAATTTTTGCAGTTCTTTCCTTTTATACTGGGCTCCTTTTGCGCGCCTGCTTGGATAGTGAACCTGGGCTAAAAACGTACCCTGATGTTGGCCAAGCTGCTTTTGGAACTGCAGGACATAATACTGTACGTGGAACTATATTAAAACATGCAAACGATTGCTTTGGAAACAAGTGCAGTAATTTTCGAAGAATGGCTTGTTGCATAGAGTATATAATTATGGAGAGCGATAACTTGTCTTCATTATTTCCAAATGCAAGCATAAGTTTGAGTGGCATTGAATTGAATTCACATGTTCTATTTGCACTGTTGACCACCTTGGCTGTTCTTCCTACTTGTTGGCTCCGTGATCTAAGTATTCTCAGTTACATCTCAGTTATTGCATCAGTTTTGGTATCTCTCTGTTTGTTGTGGATTGGGCTGGTAGATGGAGTTGGCTTTGAGCACAAAGGGACACCATTGAAACTTGCGACTCTTCCTGTTGCTTTGGGTGTCTATGGTTACTGCTACTCAGGACATGCAATGTTCCCAAATATCTATACATCAATGGCAAATCCAAATCAATTCCCTGCAGTGATATTAGCATGCTTTGGTATTTGTACCTTACTGTATGCTGGGGTGGCTGTTATGGGGTACACAATGTTTGGTGAAGCTACTCTTTCTCAGTTCACTCTTAACTTGCCTCCAGATTCAGTGGCCACCAACGTTGCTGTGTGGACAACGAACAGGACTGGTAGTTTCTACGCTCCTTGTTGCTCTTTCAGTTCCCTTCTTTGGTCTGGTGATGTCGTTGATTGGATCTTTACTCACAATGCTTGTTACCTTGATTCTTCCCTGTGCTTGTTTCCTGATAATCTTGCGTGGCAGAATCTCAAGCCTTCAGGAGCTGCATCATCTGCCTATGGAACGTACTCAGCCCTTACAAACATTATAGAAAGCTTGAGACCTTGA 1803 0.4226 MMSYRKKWYWENNIPQHMAMHAIDGIPISCQILHVKQETFTPLSHNHVSFSFFVQSGNLNFRFPFCDKSILEEYVESGTLTRAYRRSKMLNNSVSDNSFYIESDEEDVEKELNKGEADTDADGNYSDSSNFSNENQQPNMPGSYNVSWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPESLPSAKPLLQHTADEPQRRSSHTLLPPIPSRRPSMFKKDAAAKVSHEVPIPRQCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILLIFAVLSFYTGLLLRACLDSEPGLKTYPDVGQAAFGTAGHNTVRGTILKHANDCFGNKCSNFRRMACCIEYIIMESDNLSSLFPNASISLSGIELNSHVLFALLTTLAVLPTCWLRDLSILSYISVIASVLVSLCLLWIGLVDGVGFEHKGTPLKLATLPVALGVYGYCYSGHAMFPNIYTSMANPNQFPAVILACFGICTLLYAGVAVMGYTMFGEATLSQFTLNLPPDSVATNVAVWTTNRTGSFYAPCCSFSSLLWSGDVVDWIFTHNACYLDSSLCLFPDNLAWQNLKPSGAASSAYGTYSALTNIIESLRP 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2618 600 PANTHER OS05G0424000 PROTEIN-RELATED 257 532 - -
Lele05g2618 600 MobiDBLite consensus disorder prediction 122 146 - -
Lele05g2618 600 MobiDBLite consensus disorder prediction 107 121 - -
Lele05g2618 600 MobiDBLite consensus disorder prediction 189 223 - -
Lele05g2618 600 MobiDBLite consensus disorder prediction 105 146 - -
Lele05g2618 600 Pfam Transmembrane amino acid transporter protein 248 521 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2618 Lele-ChrLele05 42015405 42027313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2618 90 525 Amino Acid or Auxin Permease AAAP Family AT2G39130 64.944 0.0 564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2618 05 42015405 42027313 Lele07g2637 07 31864963 31873658 hybridization
Lele05g2618 05 42015405 42027313 Lele08g2541 08 31123146 31131544 hybridization