Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2614 ATGTGCAAGCCTAAACAGAGCTCGAAGAGACTGTTGGCGATATTCATTTGGTTAGGAATTGTGGCGCCATTAATAAGCTTCTTCAATGTGATAAGTTGCCAAGACGTCGCCGCCAATGACTACGACGACCAAATCCACAATCCAGCTGTTCTTCCCCTCGTTACGCAGCTTTTGTACTCTCGAATTTCCAATCTCACCTCCCTTCTCAGTCGCGAAATCGGCCATCGCTCCAGTTTCTGCATCAAAGATCCGGAAACTGAGTGGAACCAAGCATTTAACTTCTCTTCAAATTTGGATTTCTTGAGTTCTTGCATTAGAAAAACCAAAGGTGATATCACAAAACGCTTGTGTACAACAGCGGAGATGAGATTTTACTTTAATAGTTTCTTTAAAAGTTCAACAAGTGCCAATTTCCTAAATCCTAACAAGAACTGTAATTTAACCTCATGGGTCTCTGGTTGCGAGCCAGGATGGGCTTGTAGTGTTGCCCCACAACAGCAGGTTGACCTTCAGAATTCAAAGGAGATACCTGCAAGAACTACAAGTTGCCAAGCATGTTGTGAGGGCTTCTTTTGTCCTCATGGCCTCACTTGCATGATACATATCTTTACCAATTGCCTCCGTATCAGCCGAACCATACATGTGGAGGAGCAAATATTTGGGCCGATTTTAGTAGCAGTAGTGAGATGTTTTGTTCGGCTGGATCATACTGTCCAACAACCACCAAAAGAGTCCATTGCAGTAGTGGGTATTATTTTTGTCTCAGAACCTGGCATTATTGCAGGATGGGTTCTACATCTGAGAAAAGTAAGATTCCAGAAGAATTGTGAATCATTGGTGCAAAAATTTTATATTCAAGTCTCAGGTAAGACAACATTTCTTTCAGCTCTAGCTGGGAAGGCACATGGATGCACTGCAACTGGTTCAATTTTTATAAATGGAAAGAATGAATCTATCCACTCCTATAAGAAAATTATTGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTAACAGTGGAAGAGAACCTTTGGTTCAGTGCACAGTGCAGGCTATCCTCTGACTTGTCAAAACCAGATAAAGTTCTAGTTGTTGAAAGAGTTATTGAATTCATGGGACTTCAGTCAGTGAGAAATTCCTTGGTTGGAACTGTGGAAAAGCGAGGAATCTCTGGAGGACAAAGGAAACGTGTAAATGTTGGATTGGAGATGGTCATGGAACCTTCACTTTTGATCTTGGATGAACCCACATCTGGTTTGGACAGTGCATCGTCTCAACTCCTTCTTAGAGCACTTAGACGTGAAGCTCTTGAGGGGGTAAACATTTGCATGGTCGTGCACCAACCCAGCTATGCCTTGTTCAAGATGTTTGATGATTTAATTCTTCTGGCAAAAGGTGGTCTTACCGTCTATCATGGATCAGTCAAGAAGGTCGAAGAGTACTTTTCGGGTCTAGGGATCAATATCCCAGAACGGATCAATCCTCCAGAATACTTCATTGACATTCTGGAGGGTATATCAGTACCTGGTGGAAGCTCAGGTATGAGCTATAGAGAGCTTCCAATTAGTTGGATGCTTTATAATAACTACCCAGTACCTTTTGATATGCAGCAGAGTGCATCTAAATTTGATGTATCATCTCAAAGTGTAAACGCTGCTAATGAAATGGTTCCTAATGGTTCTGGCCATCAACAAACCTTTGCTGGAGAATTATGGCAAGATGTTAGACACATTGTAGAACTGCAGAGCGAAAAGATTAAACATAATCATTCGAAGTCCATGGATTTGTCTAGCAGGAAAACTCCTGGTGTGTTTAAGCAATCTAAGTACTTCCTAATAAGGGTTGGTAAGCAGAGACTACGGGAAGCTAAAATTCAAGCTATGGATTACCTGATTTTATTACTTGCCGGAGCTTGCTTAGGATTGCTTTCAAAAACGACTGAACAAACGTTTGGTGCAGCTGGGTACACATACACTGTCATAGCTGTCTCTCTTCTATGCAAAATAGCAGCCTTGAGAACCTTTTCTCTGGATAAAGTGATATACTGGAGGGAGAGAAATTCCGGCATGAGTAGCTTGGCTTATTTTCTGTCAAAGGACACAATTGATCAATTTAATACAGCCATCAAGCCTCTAGTGTACCTCTCCATGTTCTATTTTCTCACTAATCCAAGATCTTCTTTTGCTGATAACTACATTGTGCTTCTCTGTCTTGTTTACTGTGTCACTGGCATAGCTTATGCTTTGGCCATGTTCTTTGAACCTGGTGCTGCCCAGCTTTGGTCAGTACTTCTTCCGGTTGTTTTGACGCTCATTGCAACAAAACAAAAGGATAGTGACTTTCTGAAGGGCATAGCTAATGTCTGCTATTCTAAGTGGGCTCTGCAAGCATTTGTGATTGCAAATGCTGAGAGGTATCATGGAGTTTGGCTCATAACTCGTTGTGGATTACTTAAGGAAAGCGGCTATAATCTTCATGATTGGAATTTGTGCCTATTAATCCTCATTTGTATAGGCATAATTAGTCGAGTTCTAGCATTTTTCTGTATGGTCTCTTTTCAAAAGAAGTAA 2574 0.413 MCKPKQSSKRLLAIFIWLGIVAPLISFFNVISCQDVAANDYDDQIHNPAVLPLVTQLLYSRISNLTSLLSREIGHRSSFCIKDPETEWNQAFNFSSNLDFLSSCIRKTKGDITKRLCTTAEMRFYFNSFFKSSTSANFLNPNKNCNLTSWVSGCEPGWACSVAPQQQVDLQNSKEIPARTTSCQACCEGFFCPHGLTCMIHIFTNCLRISRTIHVEEQIFGPILVAVVRCFVRLDHTVQQPPKESIAVVGIIFVSEPGIIAGWVLHLRKVRFQKNCESLVQKFYIQVSGKTTFLSALAGKAHGCTATGSIFINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSSDLSKPDKVLVVERVIEFMGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLAKGGLTVYHGSVKKVEEYFSGLGINIPERINPPEYFIDILEGISVPGGSSGMSYRELPISWMLYNNYPVPFDMQQSASKFDVSSQSVNAANEMVPNGSGHQQTFAGELWQDVRHIVELQSEKIKHNHSKSMDLSSRKTPGVFKQSKYFLIRVGKQRLREAKIQAMDYLILLLAGACLGLLSKTTEQTFGAAGYTYTVIAVSLLCKIAALRTFSLDKVIYWRERNSGMSSLAYFLSKDTIDQFNTAIKPLVYLSMFYFLTNPRSSFADNYIVLLCLVYCVTGIAYALAMFFEPGAAQLWSVLLPVVLTLIATKQKDSDFLKGIANVCYSKWALQAFVIANAERYHGVWLITRCGLLKESGYNLHDWNLCLLILICIGIISRVLAFFCMVSFQKK 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2614 857 Pfam ABC-2 type transporter 448 857 IPR043926 GO:0140359
Lele05g2614 857 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 288 845 - -
Lele05g2614 857 Pfam ABC transporter 288 419 IPR003439 GO:0005524
Lele05g2614 857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 288 483 IPR027417 -
Lele05g2614 857 Gene3D - 286 485 IPR027417 -
Lele05g2614 857 ProSitePatterns ABC transporters family signature. 391 405 IPR017871 GO:0005524|GO:0016887
Lele05g2614 857 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 246 492 IPR003439 GO:0005524
Lele05g2614 857 FunFam ABC transporter G family member 24 285 486 - -
Lele05g2614 857 CDD ABCG_EPDR 288 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2614 Lele-ChrLele05 41977379 41988467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2614 288 480 Calmodulin-binding Proteins AT2G36910 25.000 1.31e-06 50.4