Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2612 ATGATGATGAAGTTGAAGACCAAATTGTTCAGAAGAGAACTTGGTACGTTATTGAGAGTTGTGAAATGGGTTAGGTTTTGTTTCTTCGAGGAAGAGGCAAACATACCAAAAGATGTTCCCAGAGGTCACATGGTTGTGTATGTGGGTGAGGATTGTAAGAGATATGTGATTAGGGTTTCTGCGGTGAACCATCCACTGTTCAAGGCGTTGCTTGATCATGCTGAGGATGCTTTTGGATTCACTAATGCCTCTAATAAACTCCACCTTCCTTGCAGTGAGAGGATTTTTCTAAGCATCCTTCATAATGCTTCTCTTCTTCAACATTGA 327 0.4098 MMMKLKTKLFRRELGTLLRVVKWVRFCFFEEEANIPKDVPRGHMVVYVGEDCKRYVIRVSAVNHPLFKALLDHAEDAFGFTNASNKLHLPCSERIFLSILHNASLLQH 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2612 108 Pfam Auxin responsive protein 33 100 IPR003676 GO:0009733
Lele05g2612 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 36 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2612 Lele-ChrLele05 41949954 41950280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2612 13 100 Calmodulin-binding Proteins AT4G34750 37.634 1.65e-17 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2612 05 41949954 41950280 Lele07g2630 07 31786172 31786495 hybridization
Lele05g2612 05 41949954 41950280 Lele08g2532 08 31049128 31049586 hybridization