Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2604 ATGTTTCTGGTTATGGATGAGAAGTTTTCGTCCGAGAAGTGCTTGGATTCTCAATTATGGCATGCCTGCGCCGGTGCGATGGTTCAAATGCCACCAATGAATTCGAAGGTCTTCTACTTCCCTCAGGGCCACGCGGAGCACGCTCAGGCGAAGGTAGATTTGGGGTCGGCGTGGACACGAATTCCTCCTTTCATTCCTTGCAGGGTTTCTGGTATGAAATACATGGCAGACCCCGACACAGATGAGGTGTTTGTGAAAATGAGACTAACCCCTCTAAGAGATAATGAGATCGGCTTTGAAGATGACACTTTTCCGGGGAACCATGGAGTTGAGAATCAAGAAAAGCCAGCTTCTTTTGCTAAGACATTGACTCAATCTGATGCCAATAACGGTGGAGGTTTCTCTGTTCCTCGTTACTGTGCAGAGACCATCTTCCCCAGGTTGGATTATTCTGCAGAACCACCAGTTCAAACCATTATTGCCAAAGATGTGCACGGGCAAAACTGGAAGTTTAGGCATATCTATAGAGGGACCCCTCGCCGGCACCTTTTAACAACCGGATGGAGCAATTTCGTGAACCAGAAGAGGCTGGTTGCTGGGGATTCTATTGTGTTCTTGAGGGCTGAGAATGGAGATCTCTGCGTCGGAATAAGGAGGGCTAAGAAGGAGATTGGTGGTGGAATTGAGTATCCAACCGGTTGGAATCAGGCAGTTCCATCACTATTTGGTGGGAATTCGGGTTTTATGCGTGAAGATGAGAGCTCATTGTTGAGGAGAAAATCTCATGAGGAGATGAAGGGAAGAGGGACTGATGAATCTGTTATTGAAGCTGTGACTTCTGCTGTTAATGGCAGGCCCTTTGAGGTCGTTTACTATCCTCGAGCTAGCACGCCGGAGTTCTGTGTTAAGGCCTCGTCGGTAAGGGCTGCAATGCAAATACAGTGGTGTTCTGGGATGAGATTCAAAATGCCTTTTGAAACTGAGGATTCCTCCAGGATCAGCTGGTTCATGGGCACAATATCTTCTGTTCAAGTTGCTGATCCCATTCGTTGGCCTGATTCTCCATGGCGTCTTCTTCAGGTAGCGTGGGATGAACCAGATTTGCTTCAGAATGTTAATAGTGTAAACCCTTGGTTGGTTGAACTAGTGTCGAATATGCCAACTTTCCATCTCTCTCCGTTCTCGCCACCGAGGAAGAAATCGCGGTTTCTACAGCATCCGGAATTTCCTCTCCTCAGTCAGCTTCCTATGCCACCGTTCTCCGCTGGGAACCTCCTCAATCAAACTAACAACTCCCCTTGTAACGTTCATGACAGTTATAGTCCTGCGGGCATACAGGGAGCCAGGCATGCTCAATATGGTCTCTCTCCATGCGATTTCCCTTTCAACAAGCTGCAATCGGATATGCTTCTTGGCAAACTTCCGAGGCTCGAACACGCTGTCCAGACTCCGAGACCTCCTCGTAGCGCCTACAATAGCGGCCTGAAGAACAACGCCGAGATATCGTGCCTGTTGACCATGGGAAATCCCGGCCCGAGCTTGAAGGAACCGATGGATGCCAAAACACCACATATCTTCTTGTTTGGTCAACGCATTCACACTGAACAGCAGAGTTCAAACAGTAGCTCTGCTAGTACAACTGGGAATAGTTCATCCAAAGGGACTTACCAGAAGGCATCCAATGTTGTTTCCGACGGCTCTGGTTCTGCTTTACACCGAAACAGTCCGACAGAGAATTCTTCTGAAGGAGGGTCTCCCTGGTACAAAGATCAGCACAGTTCTGAAATCGGAGCCGAAAACGTTAACCTCTTGTGTTTGGCTTTATGA 1827 0.4828 MFLVMDEKFSSEKCLDSQLWHACAGAMVQMPPMNSKVFYFPQGHAEHAQAKVDLGSAWTRIPPFIPCRVSGMKYMADPDTDEVFVKMRLTPLRDNEIGFEDDTFPGNHGVENQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDVHGQNWKFRHIYRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKEIGGGIEYPTGWNQAVPSLFGGNSGFMREDESSLLRRKSHEEMKGRGTDESVIEAVTSAVNGRPFEVVYYPRASTPEFCVKASSVRAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQVAWDEPDLLQNVNSVNPWLVELVSNMPTFHLSPFSPPRKKSRFLQHPEFPLLSQLPMPPFSAGNLLNQTNNSPCNVHDSYSPAGIQGARHAQYGLSPCDFPFNKLQSDMLLGKLPRLEHAVQTPRPPRSAYNSGLKNNAEISCLLTMGNPGPSLKEPMDAKTPHIFLFGQRIHTEQQSSNSSSASTTGNSSSKGTYQKASNVVSDGSGSALHRNSPTENSSEGGSPWYKDQHSSEIGAENVNLLCLAL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2604 608 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Lele05g2604 608 FunFam Auxin response factor 117 221 - -
Lele05g2604 608 Gene3D - 117 221 IPR015300 -
Lele05g2604 608 SUPERFAMILY DNA-binding pseudobarrel domain 104 221 IPR015300 -
Lele05g2604 608 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 561 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele05g2604 608 MobiDBLite consensus disorder prediction 534 588 - -
Lele05g2604 608 FunFam Auxin response factor 315 388 - -
Lele05g2604 608 MobiDBLite consensus disorder prediction 534 593 - -
Lele05g2604 608 SMART B3_2 119 221 IPR003340 GO:0003677
Lele05g2604 608 Pfam Auxin response factor 277 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele05g2604 608 Gene3D - 314 388 - -
Lele05g2604 608 Pfam B3 DNA binding domain 119 220 IPR003340 GO:0003677
Lele05g2604 608 CDD B3_DNA 118 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2604 Lele-ChrLele05 41860290 41862470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2604 1 594 B3 DNA Binding Superfamily AT4G30080 57.851 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele05g2604 B3 4.4e-22 CL0405