Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2603 ATGCGGACTATTCCCTTGGGAATCTCACCTTCCCCAACTCCTGTAAACAATTCCAAATCCTCGTCTTCCCTCAATTTCGCTAATTTCAGAAAACCAGGATCTTCTTCCCCGTCAAGGGTTTCTCTGTCTTCCCTCAATTTCATTTCCCTCTGCCAATCAGGACTTTACAGGGCTAGTCAAGTTGCTGATCTATTCCCAACCGTGTCTCCAGAAATCATCGTTAGAGAGGCCAGGTTAGAAGACTATTGGGAAGTAGCAGAGACTCACTGCAACTCCTTCTTCCCTGAGTATTCATTCCCATTGGACTTTGTTCTGAGGATGGACAGACTGGTGGCAATGTTAGCAGGATTCTCTTTACCAAATGGTTGCAAAAGAACCTGTTTGGTTGCTGTTATTGGCAGCTCACTTAATGAAACTCTCTTCATCGGGGGTGAAGATTTCAAAATTGGTGGTCTTGATGGGAGAGTCAGCCTCAACAAGGGATATGTGGCTGGTATATTAACAGTAGATACTGTCGCGAACTTTCTCCCACGAAAAGGACCACTGAGACAGAGAAGGACTGGAATTGCATACATATCCAATGTGGCTGTTCGGGAAGAATTCAGACGCAAGGGTATCGCTAAAAAACTAGTAGAAAATGCAGAAGCTCAGGCCAGAACTTGGGGATGTCGCGCAATCGCATTGCACTGTGATTTGAACAATACTGTAGCCACAAAGCTATACAAAGGCCAAGGCTTCAAATGTATTAAGGTGCCCAAAGGCGCAAACTGGCCCCGGCCAAAGACCTCACCAGATGTTAAGTTCAATTTCATGATGAAGCTTCTCAGTAATTCAACTGTTTCTTAG 846 0.4492 MRTIPLGISPSPTPVNNSKSSSSLNFANFRKPGSSSPSRVSLSSLNFISLCQSGLYRASQVADLFPTVSPEIIVREARLEDYWEVAETHCNSFFPEYSFPLDFVLRMDRLVAMLAGFSLPNGCKRTCLVAVIGSSLNETLFIGGEDFKIGGLDGRVSLNKGYVAGILTVDTVANFLPRKGPLRQRRTGIAYISNVAVREEFRRKGIAKKLVENAEAQARTWGCRAIALHCDLNNTVATKLYKGQGFKCIKVPKGANWPRPKTSPDVKFNFMMKLLSNSTVS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2603 281 Gene3D - 67 259 - -
Lele05g2603 281 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 72 276 IPR000182 GO:0016747
Lele05g2603 281 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 71 254 IPR016181 -
Lele05g2603 281 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 279 - -
Lele05g2603 281 CDD NAT_SF 188 229 - -
Lele05g2603 281 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 72 273 - -
Lele05g2603 281 Pfam Acetyltransferase (GNAT) family 174 246 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2603 Lele-ChrLele05 41851392 41853853 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele05g2603 Acetyltransf_1 2.2e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2603 05 41851392 41853853 Lele07g2623 07 31678314 31680791 hybridization
Lele05g2603 05 41851392 41853853 Lele08g2524 08 30952402 30955628 hybridization