Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2584 ATGGGTTATTTCCAATTGTTTGTTGTTTTACTTTTATCAATTTCTATTGAAATTTGTTTATCCACCTCCCCTATCGAAGATCAAGAGAAGGATAAGATAATCAATTTACCAGGGCAGCCAGAAAATGTAGGTTTTTCTCAGTACTCTGGTTATGTAACTGTGAATGAGCAAGCAGGGAGGGCATTATTTTATTGGTTGATTGAGTCGCCTGAAAATCGTGGACCCGAGTTCAGGGCACTTGTTTTATGGCTCAATGGTGGTCCTGGATGCTCCTCTATTGCTTACGGTGCAGCTGAAGAGATTGGCCCTTTTCGAATTAGTTCTGATGGGAAGTCACTTTACATGAATCCATATGCTTGGAACAATTTGGCAAATATACTTTTCCTTGATTCTCCTGCTGGTGTGGGCTTTTCATATTCCAATGAAACATCAGATTTGTACACGGCGGGTGACCAAAGAACAGCTGAAGATGCCTATACATTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGTATAGAGATTTTTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAACTTGTTTACCATAAAAATAAGGGTGTCCAGAAATCAATTATAAATTTGAAGGGATTTATGGTTGGAAACGCTGTTACCGATGATTACAACGATTATGTTGGCACGTTTGAGTACTGGTGGACCCATGGTTTGATTTCAGATTCCTCATATACGACGCTGCAAAGGGTCTGTGACTTTGGCTCCTCCCAACATCCATCAATACAATGCATGGAGGCTCTAAGAATTGCAGAGTTAGAGCAGGGAAATATTGACCCATATAGCATTTATACACGGCCATGCAATGATACTGCATCACTCCAGCGCAGCTTGGGTGGTCGTTATCCATGGATGTCTCGAGCTTATGACCCTTGTACTGAGAGGTATTCAAGCTTGTACTTCAATCATCCTGAGGTTCAGAAAGCACTCCATGCCAATGTAACTGATATCCCATATTCATGGAAAACATGCAGTGACATCGTTGGAAACTACTGGGCCGATTCTCCACTATCTATGCTTCCAATATATCGAGAACTCATTGGTGCTGGTCTCAAGATATGGGTATACAGTGGAGATACCGACTCTGTGGTTCCATTAACTGCCACTCGATATTCCATTGACGCCTTGAAACTTCCCACCATTACAAATTGGTACCCCTGGTATGATATTGCCAAGGTTGGTGGATGGAGCCAAGTGTATGAAGGGCTTACGTTGGTTACAGTAACAGGAGCTGGACATGAAGTTCCACTGCATCGACCTCATCAAGCATTCATCCTTTTCAGGTCATTCTTGGAGAACAAGCCCATGCCAAACCCAGTTATGTCAAGTTGA 1389 0.4204 MGYFQLFVVLLLSISIEICLSTSPIEDQEKDKIINLPGQPENVGFSQYSGYVTVNEQAGRALFYWLIESPENRGPEFRALVLWLNGGPGCSSIAYGAAEEIGPFRISSDGKSLYMNPYAWNNLANILFLDSPAGVGFSYSNETSDLYTAGDQRTAEDAYTFLVNWFERFPQYKYRDFYIAGESYAGHYVPQLAQLVYHKNKGVQKSIINLKGFMVGNAVTDDYNDYVGTFEYWWTHGLISDSSYTTLQRVCDFGSSQHPSIQCMEALRIAELEQGNIDPYSIYTRPCNDTASLQRSLGGRYPWMSRAYDPCTERYSSLYFNHPEVQKALHANVTDIPYSWKTCSDIVGNYWADSPLSMLPIYRELIGAGLKIWVYSGDTDSVVPLTATRYSIDALKLPTITNWYPWYDIAKVGGWSQVYEGLTLVTVTGAGHEVPLHRPHQAFILFRSFLENKPMPNPVMSS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2584 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Lele05g2584 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Lele05g2584 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Lele05g2584 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Lele05g2584 462 FunFam Carboxypeptidase 27 289 - -
Lele05g2584 462 FunFam Carboxypeptidase 358 452 - -
Lele05g2584 462 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Lele05g2584 462 SUPERFAMILY alpha/beta-Hydrolases 28 456 IPR029058 -
Lele05g2584 462 FunFam Carboxypeptidase 308 455 - -
Lele05g2584 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 439 IPR001563 GO:0004185|GO:0006508
Lele05g2584 462 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Lele05g2584 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Lele05g2584 462 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Lele05g2584 462 Gene3D - 311 347 - -
Lele05g2584 462 Gene3D - 358 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2584 Lele-ChrLele05 41618916 41623835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2584 321 455 Calmodulin-binding Proteins AT2G22960 28.676 9.72e-13 65.1