Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2583 ATGCCGCCTGAACCACTGCCGTGGGACCGGAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCGCTGGGCTCTGTGGCGCGATGGAGAGACTCTTCTCATCATGGTTCCCGAGAGTTCAGTCGTTGGGGATCGGCCGATTTCCGCAGACCGCCAGGTCATGGTAAGCAGGGAAGTTGGCACCTGTCTTCCGAAGAATCTGGTCATGGATATGCACTATCTCGGTCCAGTGACAAGATGGTGGAAGAAGAGAACTGTCGTCCGTCTGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAAAATAGAGGATCCTTTAGCCAGAGAGATTGGAGAGGACATTCATGGGAGGCCACAAACGGCTCTCTAAATTTGTCCAGGAGGCCGTCAGATGTGACTATTGATCAGAGGTCAGCTGATGACATGCTAACATATCCTTCTCATCCTCATTCTGATTTTGTAAATACTTGGGATCAGCATCATATGAAAGACCAGCACGATAAGATGGGTGGTGTCAATGGGTTGGGTACACCACAGAGATTGGATGGGGCGCATTCTCTGGGTTCAATTGGCTGGAAGTCTCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCGCGAGGCTCAGGTTTTAGCCACACAAGTAGCTCAAGGAGTGGAGGCGCAGATTCCAATGAAGCGAAGTCTGAAATGCATCCAAAAGATGTAACTCCTATTGAAACCCATTCAGGGGATGGTGCTGCATGTGCGACATCTTCTGCACCCTCTGAAGATACAATATCTAGGAAGAAGCCTCGGTTGAATTGGGGTGAGGGACTTGCAAAGTATGAGAAGAAGAAAATTGAAGAACCTGATATAAGTGCTAGCAAGGATGGCCTTGTCTTATCTACTAGTAATATTGAGCCCTCTAGTTTTCTTGGTTCAAATTTACTACTAGATAAAAGCCCAAAAGTTACAGGCTTTTCAGATTGTGCATCCCCAGCCACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGATATGTATCGAGTTATGCCATCGTAGAGAAATGTAATGCCTATTACTCTGATGTCTGCTTACACATTTATTCCTTTGCATGTTATACTCATCATATGGACCAAGCATGTGCAGGTGTGGAGGATAAACTGTATGGAAAAGCTGTGAATAGTGACAATGATGTTAGTAATATGAATAGCTCACTGGACCTCGGGCCACAGAATCATCTACAGACGTTTTCTTTGAATTTAGAGAAGTTGTATGTTGACTCCCTGAGTAGTTTGGGTTCTTCGCTTATTGGATTGCTACAATCTGATGACCCAAGTTCTGTGGATCCTGGCATATCAAGTTCTGCTGCAATGAATAAGTTGCTGATATGGAAAGCTGACCTTTCTAAGGTATTGGAGGTTACTGAAGCTGAAATAGATTTACTAGAAAGTGAGTTGAAGTCACTGAAATCTGAATCTGGAAATAGCTGTCCGTGTACTGCAGCATTGGGCTCCTCACTGGTGGCAAACGATACAAAGTCTTGTGAAGGACAAGTTAGAGGGTACGATATGGTATCCTGGCCAGAGCCATTGCAGGTTTGTTCTTCTGCTGATCCTGATGTGGAGAAGGTGTCCCCTTCAACTAAAGCGCATAATATTCCTGAAAATGGCAAGGAGGAAGATATTGATAGTCCTGGAACAGCAACTTCTAAATTTGTGGAGCCTCAACCCCTTATAAAAGCAGTCTCTTCATGTGATGTAGGGGGATATGATAATTGCTCTGGAGGCTTTGATGCCATTCAATCTGCAAACAGTAGATGCTTAGTGCCCTGTTCCACTAGCGAGCAACCTATGGAGGTAAAGGATGGCATGGGTGCTGCTCCCGCTGCAAGTACTTGCTCTAGATCGGAGGAAATATTGTGTAATGCAATTATTGCTTCTAATAAAGAACGTGCAAACAGTGTGTGTGAAGAATTTGCTCAGTTATTGCCAAAAGATTGTTGCAAGGTTGGTAATATAGGAGCTATCAATAAATCATGCTCTTCAACTGCTGCAGTTAGAGAAAAATATGCAGAGAGGAAGCAGTTAGCAAGGATTAAGGAGCGTGTAATAACTCTCAAGTTTAAAGCCTTGCATCATCAATGGAAAGAAGATATGCGATTACTGTCTGTACGAAAATGTCGTCCAAAATCTCATAAGAAACTTGAAGTAGGCATTCGAACTACTAATAATGGTTTTCAAAAGAATCGGTTGTCCATTCGTTCTCGGATTTCCTACCCTGCAGGAAATAATTTAAGCTTGGTTCCAACATCTGAGATGAATAATTTTGTGAGCAAACTTCTCTCTGATCCCCAAGTTAAAGTTTACCGGAGCACCTTGAAGATGCCAGCATTCATTTTGGATGAGAAGGAGAAGATGATATCGAGGTTTCCATGTAGTAATGGGTTGGTTGAAGATCCTTTGGCGTATGAGAAGGAGAGGGCTACGATCAACCCTTGGACATTGGAAGAGAAAGATATTTTCTTGGAGAAATTTGCTGCTTTTGGGAAAGACTTCCGAAAAATTGCTTCATTTCTGGATCACAAGACAACTGCTGACTGCGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGTTTTGAGAAAATCAAGCAGGATGTTAGGAAGCTGGGGAAATCGTATTTTACCAACACTGACCTGGTAGCATCGGGTAAAAAATGGAATCAAGAAATAAATGCTGCTTCGCTTGAAATTTTGACTGCAGCTTCAGTTATAGCAGGCCATGCGGATAGAATAAATGGTAATAAAAAATTGCGTTCAGGAAATTCTCTTTTAGGGGGCTTTGGTAATATGAAAAGAGCAAAGGGTGAGAATAGCCTCCTAGAGAGATCGAACAGTTTTGTTGCTCTTAGGGATGAAAGAGAGGTAGTTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTATATCATCTGAGGCTATGAGTTCTTGCATAACAAGTTCTGTGGGTCCTGTAGAGGGTAGCAGGGAGAGGAGTCTTAAAACAAACCCTGGGAAAAAGCAATTGTTGATGCCTAATGTTACTCATAGTGTTGATGATGATACCTGTTCAGATGAGAGCTGTGAGGAGATGGATCCTGCTGATTGGACTGATGAGGAGAGGTCAGCTTTTCTTCAGGCTGTATCATCTCATGGGAAGGACTTTGCTAAGATCTCACGGTGCATAGGTTCAAGGTCCCAATATCAGTGTAAAGTGTTCTTCAGCAAGGCTAGGAAATGTCTTGGATTGGATCTCATGCGGCCCAAGTCTGTAAATGCAGGATACCCAGTGAATGATGATGCAAATGGTGGTGGGAGTGATACAGATGACGCATGTGTTGTAGAGACAGGTTCCGCAATTGGCCCTGATAGGTCAGGCACTAGAACTGATGAGGATCAGCCATTGTCCGTCATGAATATATACTCTGATGAATTTAATTCTGTTGAACCCAGGATCTTGTCAACTGATTTGAATAAATCAAATAATATTGGGGCAGAAGTGGATCAAGATGGTGAAGATGTGGATGATATGGTTTCTGAAGCTTGTGAAACGGATGATAAGCCTAAACTGGGCTATGTTGGTGGTGGGGATGTCTTGTACAGTTCTGACAAGTCTGGTCCTGCCAGTGGCCAGACAGATATGAATACGTTAGTTAGTGTAGCAGTGGGAGAAGATGAAGCTAATAAATTGGCAAGTGCAGTTACAGAGTCAGTACCATACCAATCTAATTCTGTTGTTGAGGGTAAAGGGGTTTCTGAGGTTTCTTCTGTGGGTCTTGGGAAGGAGTTAACAGGGCAGAAACAATCACTGCCTCCATGTCTTGATGATAGGGATAATAAACGTGAAGCTGTTTTTGATGCACCTGAATCAAAAAGCTCAGTTCCAGATTCAAGTACCAAAGTAAACGCTTTGCCCTTGCGTGCAGGCGCTTCTTGTACAGGCTTGAATCTTGAAGCTGAAAATAAGCACCAAGTGTCTCTTGGAGAGCCCTGTATATCAGCATTGCCCCGGGGAGATTTTCAGTCCAATGCAAAATTATTGTTGCAAGATACTATTGCTGTTCATGGTGAGCAAAAAGTTATTCAAGATCAACTGCATTCTGTACGGAATTTTCAGGGTAGTAGAGATGGGCACTGTCAAAATTCCACAAGCGAAAATGGTCAACATGTTCATATTCCCAGCCTTTTATTGGACCATGTTGAGGCTAGTAGCATCCTGCAGGGCTTTTCCTTGCCCATTAAACAAGAAGTGAAGGGTGATGTTAGTTGCAGCAGTTCAGCATCTGAATTTCCACTCATGTCCCAAAAGATTGAACAAGCCTGTGATCCTTATAAATCAGAGTCACGCCATTCAGTAGATTCTGAAGTGACTTCCAGAAATGGTGATGTGAAGTTGTTCGGGAAGATATTAACCAATCCTTCATCCACTCAGAAATCTAATTTGAATTCCAAGGGACGTGAAGAAGCTGGTACCCGTCACCTGAAGATGAGCAGCAAGTCTTCCACCCTGAAATTTAATGGCCATTGTCATCGAAATCCTGATGGAAATTCAACAATTTTGAAGTTTGATTGTGGTGATTACAATGTAGGCCTGGAAAATGTACCCATGAGGAGTTATGGTTATTGGGATGGGAATAAAATACAGACTGGCATTCCTTCATTACCTGATTCTGCCATCATGCTTGCCAAATATCCTGCTGCCTTTAGTAATTATGCTACATCCTCATCTAAACTGGAGCAGCAGTCAGTGCATGCATTTACCAAAAGTAATGAACAGCACCTGAATGGCTCTGCGTTCACAACTCGAGAAATCAATAACAGCAATGGTGTGATAGATTATCAGATGTTTAGAAGTAGGGATGCCCCGAAAGTGCAGCCATTCATGGTAGACATGAAAAACCGGCAAGATGTATTTTCCGAGGTGCAGAGAAGAAATGGTTTTGAAGCAATAGCAAATTTACAGCAGCAGGGGAGAGGAATAGTTGGATTGAATGGTGTTGGGAGGCCCGGGATTCGGGTGGGAGGATCACACAGTGGTGTCTCGGATTTTGTGGCAGCCATCAAAATGCATTATTCCAATTCTGACCAGTATGGTGGTCATAATGGAAGTAGTATCATGAGAGAAGATGAATCATGGGGAGGAAAAAAGGGGGACTTAAGCAGGTAG 5199 0.4322 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHGSREFSRWGSADFRRPPGHGKQGSWHLSSEESGHGYALSRSSDKMVEEENCRPSVSRGDGKYGRNSRENRGSFSQRDWRGHSWEATNGSLNLSRRPSDVTIDQRSADDMLTYPSHPHSDFVNTWDQHHMKDQHDKMGGVNGLGTPQRLDGAHSLGSIGWKSLKWTRSGSLSSRGSGFSHTSSSRSGGADSNEAKSEMHPKDVTPIETHSGDGAACATSSAPSEDTISRKKPRLNWGEGLAKYEKKKIEEPDISASKDGLVLSTSNIEPSSFLGSNLLLDKSPKVTGFSDCASPATPSSVACSSSPGYVSSYAIVEKCNAYYSDVCLHIYSFACYTHHMDQACAGVEDKLYGKAVNSDNDVSNMNSSLDLGPQNHLQTFSLNLEKLYVDSLSSLGSSLIGLLQSDDPSSVDPGISSSAAMNKLLIWKADLSKVLEVTEAEIDLLESELKSLKSESGNSCPCTAALGSSLVANDTKSCEGQVRGYDMVSWPEPLQVCSSADPDVEKVSPSTKAHNIPENGKEEDIDSPGTATSKFVEPQPLIKAVSSCDVGGYDNCSGGFDAIQSANSRCLVPCSTSEQPMEVKDGMGAAPAASTCSRSEEILCNAIIASNKERANSVCEEFAQLLPKDCCKVGNIGAINKSCSSTAAVREKYAERKQLARIKERVITLKFKALHHQWKEDMRLLSVRKCRPKSHKKLEVGIRTTNNGFQKNRLSIRSRISYPAGNNLSLVPTSEMNNFVSKLLSDPQVKVYRSTLKMPAFILDEKEKMISRFPCSNGLVEDPLAYEKERATINPWTLEEKDIFLEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKIKQDVRKLGKSYFTNTDLVASGKKWNQEINAASLEILTAASVIAGHADRINGNKKLRSGNSLLGGFGNMKRAKGENSLLERSNSFVALRDEREVVAADVLAGICGSISSEAMSSCITSSVGPVEGSRERSLKTNPGKKQLLMPNVTHSVDDDTCSDESCEEMDPADWTDEERSAFLQAVSSHGKDFAKISRCIGSRSQYQCKVFFSKARKCLGLDLMRPKSVNAGYPVNDDANGGGSDTDDACVVETGSAIGPDRSGTRTDEDQPLSVMNIYSDEFNSVEPRILSTDLNKSNNIGAEVDQDGEDVDDMVSEACETDDKPKLGYVGGGDVLYSSDKSGPASGQTDMNTLVSVAVGEDEANKLASAVTESVPYQSNSVVEGKGVSEVSSVGLGKELTGQKQSLPPCLDDRDNKREAVFDAPESKSSVPDSSTKVNALPLRAGASCTGLNLEAENKHQVSLGEPCISALPRGDFQSNAKLLLQDTIAVHGEQKVIQDQLHSVRNFQGSRDGHCQNSTSENGQHVHIPSLLLDHVEASSILQGFSLPIKQEVKGDVSCSSSASEFPLMSQKIEQACDPYKSESRHSVDSEVTSRNGDVKLFGKILTNPSSTQKSNLNSKGREEAGTRHLKMSSKSSTLKFNGHCHRNPDGNSTILKFDCGDYNVGLENVPMRSYGYWDGNKIQTGIPSLPDSAIMLAKYPAAFSNYATSSSKLEQQSVHAFTKSNEQHLNGSAFTTREINNSNGVIDYQMFRSRDAPKVQPFMVDMKNRQDVFSEVQRRNGFEAIANLQQQGRGIVGLNGVGRPGIRVGGSHSGVSDFVAAIKMHYSNSDQYGGHNGSSIMREDESWGGKKGDLSR 1732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2583 1732 MobiDBLite consensus disorder prediction 207 227 - -
Lele05g2583 1732 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1047 1096 IPR017930 -
Lele05g2583 1732 MobiDBLite consensus disorder prediction 1484 1508 - -
Lele05g2583 1732 MobiDBLite consensus disorder prediction 8 27 - -
Lele05g2583 1732 Coils Coil 463 490 - -
Lele05g2583 1732 MobiDBLite consensus disorder prediction 228 242 - -
Lele05g2583 1732 Gene3D - 807 879 - -
Lele05g2583 1732 MobiDBLite consensus disorder prediction 1708 1732 - -
Lele05g2583 1732 MobiDBLite consensus disorder prediction 33 47 - -
Lele05g2583 1732 Pfam Myb-like DNA-binding domain 1046 1086 IPR001005 -
Lele05g2583 1732 Pfam Myb-like DNA-binding domain 830 871 IPR001005 -
Lele05g2583 1732 SMART sant 827 875 IPR001005 -
Lele05g2583 1732 SMART sant 1043 1091 IPR001005 -
Lele05g2583 1732 MobiDBLite consensus disorder prediction 78 114 - -
Lele05g2583 1732 SUPERFAMILY Homeodomain-like 1044 1093 IPR009057 -
Lele05g2583 1732 CDD SANT 1047 1085 IPR001005 -
Lele05g2583 1732 MobiDBLite consensus disorder prediction 534 568 - -
Lele05g2583 1732 ProSiteProfiles SANT domain profile. 829 877 IPR017884 -
Lele05g2583 1732 MobiDBLite consensus disorder prediction 1 117 - -
Lele05g2583 1732 ProSiteProfiles SANT domain profile. 1046 1093 IPR017884 -
Lele05g2583 1732 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1728 - -
Lele05g2583 1732 MobiDBLite consensus disorder prediction 207 266 - -
Lele05g2583 1732 Gene3D - 1005 1100 - -
Lele05g2583 1732 SUPERFAMILY Homeodomain-like 814 875 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2583 Lele-ChrLele05 41600086 41607154 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele05g2583 Myb_DNA-binding 9e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2583 05 41600086 41607154 Lele07g2604 07 31424977 31432263 hybridization
Lele05g2583 05 41600086 41607154 Lele08g2501 08 30697510 30704585 hybridization