Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2573 ATGGGGAAGAAAGGGTGTTGGTTTTCTTCAGTGAGGAAAGTTCTCAGTCCTCATCCCAAGAAAGATCAGGATAAAAAGCAGAAGTCAAATGAAGTAGTAGGTTATGACAAAGCTTTGCCAAATGAAGGAGCTCAATTTGCTGTTCCTCCTGCTCTTCCATCCATAGGAGCAGAGAATGAGCAGAGCAAGTTCGCTTATTCTCTGGCTCTTGCCACTGCTGCTGCAGCAGAGGCTGCTGTTGCTGCTGCTCAGGCTGCAGCAGAGGTTGTTCGTCTTACTAGCGTGTCCCGTTTCCATGGAAAGTCGAAGGAAGACATGGCAGCTATCAAAATTCAGACAGCATTTCGAGGATATTTGGCAAGAAGAGCATTGCGTGGCTTGAAAGGTTTGGTGAGGTTGAAGAGATTGATACAGGGGAAATCTGTTAAACGACAAGCAGCTTCTACCTTAAGATGCATGCAGACCCTGACACGATTGCAGTCTCAGGTCCATGAGAGGAGGGCTAGGATGTCTGAGGAGAACCAAGCTCTTCAGTGGCAGCTGCAGCAGAAACAAGCAAAAGAACTTGAGAAGTTGCAAGCTGCTCAGATTGTTGAAGATTGGGATGATACAGCGCAATCAATGGAGCAAATTGAAGCAAAACAGTCTAAAAGGCAAGAAGCTGCTGTTCGAAGAGAGAGAGCTCTGGCCTATGCGTTTTCACATCAGCAAAAGTGGAGGAACTCTTCAAAATCTGCAAATTCCAATCCCACCACATTTGTAGATCCAATCAATCCACACTGGGGTTGGAGTTGGCTAGATCGATGGGATACCCAAAGTGGTTTGGTTCATAGCGAGCGTGCATCGACAAAGAGCATGGCGAGCCAACCCTTGCCTGTTGGAGAAATTACTAAACTGTATACTTCTCGCGGTCCTATTCATCACAACAATAACAAGCCTTCTCCGGCTGGCCAAAAATCAAGCCGGCCCCCAAGTCACCGGTCTTCTTCAACCACACCTCAAAAGGCCCCATCTGTCTCATGTACTTCCGGCAAAGTAAGGGCACCAAGCCCAAAGACATCTTCTTGGGGCCGTGATGATGACTTGAGGAGCACAACTAGTACTCAGTCACATCTGTATCGGAGACATACTATTTCAGGATCATCGTTTAGAGACGACGAGAGCATTGCAAGCTTATCAGCCCTCTCAACTTGCACGGTTCCTACCAAGTCAGGTAAGGCCAAATCCAGAATTGAGAGTCCATCACAGAATGCAGATAAAAATGGGACACCTGAGAAAGGATCCAATGTGAAGAAGCGATTATCCTTCACAGATTTGCCGGCTTGTTTGAGGAATCATTCTGGTCCTCTTAAGGTGGATCTTGTGGCTTCCAATAAGGATGCTTCTTCGGTCACTAAGAAGAAAGTTGCCCATGGTGGCAGGATCAATTGCTCTTTGGATCAATTTTATCTTGCTACACCATTTCTAGCTTGCCTTGCTGTAGCTGCTGCAGCTCTTGCTGGTAGGTATGGGATTCAAGCTTGGCAAGCTCTCAAGGCACGGCCCCCAAAACCCAGAGTACGTAAGTTCTATGAAGGTGTTTTCCAGCAAGCTATGACAAGAAGAGAAGCATCTCTAATTTTGCGTATCAGGTGA 1635 0.4679 MGKKGCWFSSVRKVLSPHPKKDQDKKQKSNEVVGYDKALPNEGAQFAVPPALPSIGAENEQSKFAYSLALATAAAAEAAVAAAQAAAEVVRLTSVSRFHGKSKEDMAAIKIQTAFRGYLARRALRGLKGLVRLKRLIQGKSVKRQAASTLRCMQTLTRLQSQVHERRARMSEENQALQWQLQQKQAKELEKLQAAQIVEDWDDTAQSMEQIEAKQSKRQEAAVRRERALAYAFSHQQKWRNSSKSANSNPTTFVDPINPHWGWSWLDRWDTQSGLVHSERASTKSMASQPLPVGEITKLYTSRGPIHHNNNKPSPAGQKSSRPPSHRSSSTTPQKAPSVSCTSGKVRAPSPKTSSWGRDDDLRSTTSTQSHLYRRHTISGSSFRDDESIASLSALSTCTVPTKSGKAKSRIESPSQNADKNGTPEKGSNVKKRLSFTDLPACLRNHSGPLKVDLVASNKDASSVTKKKVAHGGRINCSLDQFYLATPFLACLAVAAAALAGRYGIQAWQALKARPPKPRVRKFYEGVFQQAMTRREASLILRIR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2573 544 Coils Coil 167 187 - -
Lele05g2573 544 MobiDBLite consensus disorder prediction 403 431 - -
Lele05g2573 544 MobiDBLite consensus disorder prediction 403 430 - -
Lele05g2573 544 Gene3D iswi atpase 101 128 - -
Lele05g2573 544 PANTHER IQ-DOMAIN 5-RELATED 1 449 - -
Lele05g2573 544 MobiDBLite consensus disorder prediction 302 370 - -
Lele05g2573 544 SMART iq_5 103 125 IPR000048 GO:0005515
Lele05g2573 544 MobiDBLite consensus disorder prediction 303 350 - -
Lele05g2573 544 Pfam IQ calmodulin-binding motif 106 125 IPR000048 GO:0005515
Lele05g2573 544 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2573 Lele-ChrLele05 41485995 41491900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2573 1 453 IQD Protein Family AT5G03040 42.675 8.68e-99 305