Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2543 ATGAGATCACCCGGCCAGTTTTCTGAGAGATGTTCAATGGAGGATACGGATCAATCATGGGTCCCTCCAGGATTTAGATTTCATCCAACAGAGGAGGAACTTGTAGGATATTACCTCAAGAGGAAGATAAACTCTCTCAAAATCAACTTAGATGTCCTTGTTGAGCTAGATCTCTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAGCAGAACGAGTGGTATTTTTTCAGCCACAAGGACAAGAAGTATCCAACAGGGACAAGAACGAATAGGGCAACAGCAGCAGGATTCTGGAAAGCAACTGGGAGAGACAAAGCAGTGATGTCGAAGAACAAGATCATAGGTATGAGGAAGACCCTTGTCTTCTACCAAGGTCGTGCCCCTAATGGCCGGAAATCCGACTGGATCATGCATGAATATCGCCTTCAATCTTCCGAGCATGCCCCTTCTCAGGAAGAAGGATGGGTAGTGTGCCGAGCATTCAAAAAGCCAAGTCCTAGTCATCATGTGGGGCCAGGTTTTGAATCACAGTGTTATTTCAGAGATCAGATCAGCAGCCATGGAAGGCCCTTGATCTCTTCATTTTCTGAGATTCTGAATCAAACCCATCATTTTCTGAATAACAATAACTCTCATTATCAAGGTACAAGCCTAAGTCCTCATCATCATCATCAACCTTTAATCAGCTTGGATCAGCAGAATCAACAACTTGTTGATCTTCCTCAACTAGATAGCCCAAGTCTAGGAATAAGATCGTCATCAGATAACTATGGTGGACAAAACAACATTAATCTTGGGGAAGAATATTACAGTGATGACGTGGAAAGCTTGGACCATTTCTTTGCTACCAATCTGACAGATACAACTTCTTCTGCTGCTGCTTCTGCTTTCTTTTCCATGAACATGATGCCACATAACAACGAACTAGTAATACCTCATCACAATCATCAAGCAAGGCAAGCCCTAGGAATCTGCTTTCCTGATTCATAG 1011 0.4293 MRSPGQFSERCSMEDTDQSWVPPGFRFHPTEEELVGYYLKRKINSLKINLDVLVELDLYKMEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNKIIGMRKTLVFYQGRAPNGRKSDWIMHEYRLQSSEHAPSQEEGWVVCRAFKKPSPSHHVGPGFESQCYFRDQISSHGRPLISSFSEILNQTHHFLNNNNSHYQGTSLSPHHHHQPLISLDQQNQQLVDLPQLDSPSLGIRSSSDNYGGQNNINLGEEYYSDDVESLDHFFATNLTDTTSSAAASAFFSMNMMPHNNELVIPHHNHQARQALGICFPDS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2543 336 FunFam NAC domain-containing protein 30 174 - -
Lele05g2543 336 Pfam No apical meristem (NAM) protein 22 149 IPR003441 GO:0003677|GO:0006355
Lele05g2543 336 ProSiteProfiles NAC domain profile. 21 170 IPR003441 GO:0003677|GO:0006355
Lele05g2543 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 241 - -
Lele05g2543 336 Gene3D NAC domain 30 173 IPR036093 GO:0003677|GO:0006355
Lele05g2543 336 SUPERFAMILY NAC domain 14 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2543 Lele-ChrLele05 41202121 41206224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2543 13 336 NAC Transcription Factor Family AT1G71930 54.412 8.94e-111 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele05g2543 NAM 9.9e-37 No_clan