Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2541 ATGGAGGGAAACCAGTGGTTTGCTAATGTTAGTTTTCAGTCGGTGAAAAGTGTAAATTGCACCATCTCTGTTGATCTTGCTGCTTCTCCACCGGGTATCATATCATCAAACACAAGTTTTTCGAGTAGACTCATACCAATTGTGACCAAAGCAGCATGGGCACCAACTGTTTCTATGAAGAAATGGACAATACATTCTGTACAGATAGATGATATGATCACAAGCAAAGAAGACCAGAGTATGTGGGAAGCCTGCAGACAAGCTCTTTCGAAGTTTGATTTTAGTGTTGAAGAAAAAGACAAGATACTTGGAAAAGCATTTGGCCTTGTTAATTCGCCATATTGGGGAGAAGAACGTGAGAAAGAAATTCCCAAATTTGAAACAATGAATGGAGTATTAGAGTATCTGAGGAGTTTAAGTCTTTCTGACGAAGTTTTGACCAAGCTGCTCGAGAAATTCCCTGAGGTTCTTGGATGCAGTTTAGAGAATGAGCTGAAAACCAATGTGAAAATCCTGGAAAAGGAATGGGGTATCAAAGGAAAGTCTCTTCGAAATCTGCTCCTTCGAAATCCGAAAGTTTTGGGTTACAATGTCGATTGTAAGGGAGACTGTATCGCACAATGCACTCGATGCTGGGCTCGTTTCTAG 648 0.4074 MEGNQWFANVSFQSVKSVNCTISVDLAASPPGIISSNTSFSSRLIPIVTKAAWAPTVSMKKWTIHSVQIDDMITSKEDQSMWEACRQALSKFDFSVEEKDKILGKAFGLVNSPYWGEEREKEIPKFETMNGVLEYLRSLSLSDEVLTKLLEKFPEVLGCSLENELKTNVKILEKEWGIKGKSLRNLLLRNPKVLGYNVDCKGDCIAQCTRCWARF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2541 215 Gene3D Transcription termination factor 3, mitochondrial 56 210 IPR038538 -
Lele05g2541 215 SMART mt_12 147 179 IPR003690 GO:0003690|GO:0006355
Lele05g2541 215 FunFam uncharacterized protein LOC106769908 65 211 - -
Lele05g2541 215 Pfam mTERF 133 196 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2541 Lele-ChrLele05 41186895 41188285 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele05g2541 mTERF 2.3e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2541 05 41186895 41188285 Lele07g2557 07 30965135 30967325 hybridization
Lele05g2541 05 41186895 41188285 Lele08g2458 08 30307921 30310367 hybridization