Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2539 ATGAGTTCCAATTCCAGATTGTGTGAGAATAACAATCCCTATCCCCAAACAGAGGACGAGGCTTGCCTCTCCGCCATGTTCCTTACAACCAATCAGGTGTATCCAGCTGTCCTCAACGCAGCCATTGAACTCAACATCTTCGAGATCCTAGCCAATAAGGCCTCGCCACCTGGATCCCTCATGTCCGCTTCTGAAATCGCCTCCCATCTTTGCTCCCAGCACCCCAGCATGCCTGATCGGCTTGAACGCATGCTTCGCTTGCTCGCCAGTTACACACTCCTCACGTGCTCCTCACGTGCCAACCCTGACGGCTCCTCCGTCACTCTCTACGGCCTCTCCCCTGTCGGCAAATACTGCGTCACTAACGAAACTGGTGGCTACTTGGCTTCCTTCACCACCTTCCTCTGCTACAAAGCCCTCTTACAAATTTGGATGAACTTCAAGGAAGCAGTGGTTGATCCAGATATCGACTTGTTCAAGAAGGTTCATGGGAAGACGAGCTACGAGTACTTCGGCACGGATCCAAAGCTGAACCAGATATTCAACAAAGCAATGGGGGACGTATGTGCGACGGAGATGAATAGGGTTCTTCAAGTGTACAAAGGTTTTGAGGGAATCACAACGTTGGTTGATGTTGGAGGTGGCAATGGTCAAAACCTCAAACTCATCGTCTCCAAGTACCCTTCCATCAATGCCATCAACTTCGATCTCCCCCAAGTCATCCAACATGCTCCACCCATTCCTGGGATAGAGCATATTGGAGGAGATATGTTCATCAACGTTCCCAAGGGTGATGCCATGATATTAAAGGCAGTGTGCCATAACTGGTCGGACGAGAAATGCATAGAAATTCTGGGGAAGTGCAAGGAAGCATTGCCAGAAAATGGAGGGAAAGTGATAGTGGTGGAGTTCATATTACCAGAATCACCGGAACCAACCGAAGCATCAAAGTTAGTTTCAACTTTGGACAATCTCATGTTCATCACTGTTGGTGGAAGGGAAAGAACAGAGAAACAGTACCAGAATTTGGGGAAGCTTTCTGGTTTTTCTAGGTTCCATGTTGCTTGTCGTGCCTTCTCTGCTTTGGGAGTCATGGAATTCTACAAATGA 1110 0.4838 MSSNSRLCENNNPYPQTEDEACLSAMFLTTNQVYPAVLNAAIELNIFEILANKASPPGSLMSASEIASHLCSQHPSMPDRLERMLRLLASYTLLTCSSRANPDGSSVTLYGLSPVGKYCVTNETGGYLASFTTFLCYKALLQIWMNFKEAVVDPDIDLFKKVHGKTSYEYFGTDPKLNQIFNKAMGDVCATEMNRVLQVYKGFEGITTLVDVGGGNGQNLKLIVSKYPSINAINFDLPQVIQHAPPIPGIEHIGGDMFINVPKGDAMILKAVCHNWSDEKCIEILGKCKEALPENGGKVIVVEFILPESPEPTEASKLVSTLDNLMFITVGGRERTEKQYQNLGKLSGFSRFHVACRAFSALGVMEFYK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2539 369 Pfam O-methyltransferase domain 144 350 IPR001077 GO:0008171
Lele05g2539 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 365 IPR029063 -
Lele05g2539 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 369 IPR016461 GO:0008168
Lele05g2539 369 PANTHER O-METHYLTRANSFERASE 25 359 IPR016461 GO:0008168
Lele05g2539 369 Gene3D Vaccinia Virus protein VP39 121 369 IPR029063 -
Lele05g2539 369 FunFam Caffeic acid 3-O-methyltransferase 5 119 - -
Lele05g2539 369 PIRSF O-mtase 4 369 IPR016461 GO:0008168
Lele05g2539 369 Pfam Dimerisation domain 37 89 IPR012967 GO:0046983
Lele05g2539 369 Gene3D - 3 119 IPR036388 -
Lele05g2539 369 SUPERFAMILY "Winged helix" DNA-binding domain 18 123 IPR036390 -
Lele05g2539 369 FunFam Caffeic acid O-methyltransferase 122 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2539 Lele-ChrLele05 41163312 41167635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2539 13 369 Monolignol Biosynthesis Gene Families AT5G54160 47.486 2.69e-115 338