Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2537 ATGGAAGATCCAGAGGAAGAAGAGCTTCTGAATCTCAGCCTCTCAGTTTCTGCGGGCAGAGAGAGGAAAAAGAAAGGAAAGATGATGATGATGAGTACCAGAGATCATCATCATCATCTTCTTCACAACAATAATTCCTTCTGCAACTCCTATGAACAAGCTGCAGGCTTCGAAGGGAAGATCTTCAGGCTTCTTCAAACCAGAGATCAAATGCTTCGTCAAGATCTCAACCTCCTGAGAAATAATCGAAGAGGAGTTTTAGAAGATGGTAATGGCCTCCCTCTGATTCATCTTCTTCTCAGTACAGCCACTTGTGTTGACGACAATAACATTAACTCTGCCCTAGACAACCTCACACAGCTTTACCAAACGGTCTCTCTCACCGGCGACTCCGTCCAACGCGTCGTCGCTTACTTCGCCGACGGCCTCTCCGCCCGCCTCCTCACCCGAAAATCCCCCTTCTACGACATGCTCATGGAAGAACCCACAAGTGAAGAAGAGTTCTTAGCTTTCACAGATCTTTATAGAGTCTCCCCTTATTACCAATTCGCTCACTTCACAGCCAACCAAGCCATCCTCGAAGCCTTCGAGAACGAGGAAGACAAGAACAACCGGGCATTACATGTTATAGACTTCGATGTCTCCTATGGTTTTCAATGGCCTTCTCTGATACAATCTCTGTCAGAGAAAGCCACCAGCGGCAACAGAATATCTCTGAGAGTCACCGGCTTCGGGAAGAACCTCAAAGAGCTTCAAGAAACAGAATCTCGTTTGATCAGCTTCTCAAAGGGATTCACCAATCTGGTGTTTGAATTCCAAGGTTTACTTCGTGGATCACGAGTGATTAACCTAAGGAAGAAAAAGAATGAAACAGTGGGGGTTAATTTGGTCTCTTATTTGAACACATTGAGTAGTTTTATGAAGATTTCTGACACATTGGGATTTGTTCATTCGCTTAATCCCTCCATTGTTGTGCTTGTGGAGCAAGAAGGAAGTAGAAGCCCCAGAACGTTCTTGTCGAGATTCACCGATTCGTTGCACTATTTCGCCGCCATGTTCGATTCTCTTGATGACTGCTTACCGATGGAGAGCACAGAGAGGTTGAGGATAGAGAAGAAGCTTCTCGGGAAAGAGATCAAAGCGATGTTGAATTACTACGACGTGGACGGCGTGGATTGTCCCAAGTACGAGAGGATGGAGACATGGAAGGCAAGGATGGAGAGTCATGGATTCACCGGAACAAAAGTGAGTTCAAAAGCTTTGATTCAAGCGAAGCTACTTCTGAAAATGAGGACTCATTATTCTCCGCTTCAGTATGAAGACGACGGAGGAGGAGCTGGCGGCGGCGGCAGTTTCAGGGTTTCCGAGAGAGACGAAGGAAGAGCGATATCTTTGGGATGGCAAAATAGGTTTCTTCTTACAGTCTCGGCATGGCAGACAGTAGTGTGA 1449 0.4624 MEDPEEEELLNLSLSVSAGRERKKKGKMMMMSTRDHHHHLLHNNNSFCNSYEQAAGFEGKIFRLLQTRDQMLRQDLNLLRNNRRGVLEDGNGLPLIHLLLSTATCVDDNNINSALDNLTQLYQTVSLTGDSVQRVVAYFADGLSARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFENEEDKNNRALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRVTGFGKNLKELQETESRLISFSKGFTNLVFEFQGLLRGSRVINLRKKKNETVGVNLVSYLNTLSSFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRTFLSRFTDSLHYFAAMFDSLDDCLPMESTERLRIEKKLLGKEIKAMLNYYDVDGVDCPKYERMETWKARMESHGFTGTKVSSKALIQAKLLLKMRTHYSPLQYEDDGGGAGGGGSFRVSERDEGRAISLGWQNRFLLTVSAWQTVV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2537 482 Pfam GRAS domain family 95 479 IPR005202 -
Lele05g2537 482 ProSiteProfiles GRAS family profile. 86 479 IPR005202 -
Lele05g2537 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 81 474 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2537 Lele-ChrLele05 41139231 41140679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2537 83 479 GRAS Transcription Factor Family AT1G14920 33.738 1.85e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele05g2537 GRAS 6.6e-90 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2537 05 41139231 41140679 Lele07g2550 07 30896490 30897947 hybridization
Lele05g2537 05 41139231 41140679 Lele08g2452 08 30247192 30248640 hybridization