Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2530 ATGCAAATTGGCTCTTCCCTCGTCTATAAATTCTTCAGCTCTCTCCTTCAAAATACATCTAACCGAACAACATTGGTCATCACCACTTGTTTCGTTCTCTCTCTCTCTCTCATGGCTACTAAGCAAACCGATTTGGTTAAGCCTTCTTCTCTGCAGGTTGAACCTTCTGCATCTCCGCCGGAGTCCAGCCCTTTCCGGAAAATCGTCGTCGTTGCTTCCATTGCCGCCGGGATTCAATTCGGATGGGCTCTACAGCTCTCCTTGTTGACTCCCTATGTCCAGCTTCTGGGTATTCCCCATACCTGGGCCGCTTTCATCTGGCTCTGTGGTCCCATCTCCGGTATGCTAGTTCAACCGATTGTTGGTTACCACAGTGACCGATGCACCTCCCGGTTCGGTCGCCGCCGTCCGTTCATCGCCGTCGGTGCATTCGCCGTCGCTATCGCTGTTTTCTTGATCGGTTACGCCGCTGATATGGGCCACATGTTTGGTGACTCTTTGGAGAAGAAAACGCGTCCGCGAGCCATCGCGATCTTCGTCGTCGGATTCTGGATCCTCGACGTGGCCAATAACATGCTACAAGGCCCATGCCGAGCTCTATTAGCCGACCTCGCCGCCGGCGACCAGCGGAAGACGCGGACGGCAAACTCGTTCTTCTCATTCTTCATGGCCGTCGGGAACGTCCTTGGGTACGCCGCCGGATCGTACAGTAAACTACACAATATGTTTCCGTTCACGAAAACCAAAGCCTGCGACGTGTACTGCGCGAACCTGAAGAGTTGCTTCTTCCTCTCCATCGCTCTTCTGCTGGTTCTCTCAATCGCCGCTCTGACCTACGTGAAGGAGAAGGCCCTTGAGAAAGCAACTGGCGGGAACGAGGCGGAAAATGATTCCGTGGGCGAGGGATCAGGAGGATTCCAGTGCTTCGGACAAATGTTCGGTGCTTTCCGTGAGCTGAAGAGGCCCATGTGGATTTTACTCCTGGTGACGTGTCTCAACTGGATTGCTTGGTTCCCTTTCTTGTTGTTCGACACGGATTGGATGGGTAGGGAGGTGTACGGTGGAACTGTTGGGGAAGGTAGGGCGTACGATAAAGGAGTGCGCGCGGGTGCATTGGGTCTTATGCTCAACTCCGTTGTGCTTGGCGTGGTGTCGTTGGGCATGGAGGTGTTGGCGCGTGGGGTTGGTGGCGTGAAGAGGTTATGGGGAATCGTTAACTTCATTCTCGCCATATGTTTGGCCTTGACCGTGTTGATCACCAAGTTGGCCGAGCACTCACGGCAGTTCGCCCCCGGCTCTACCGATCCTCTGCCACCTTCCACCGGGGTTAAGGCCGGCGCGTTAACTCTCTTCGCGGTGCTCGGAATTCCACTGGCGATTACTTACAGTATCCCTTTTGCACTAGCATCCATATTCTCCAGCTCTTCAGGGGCAGGCCAAGGGTTATCTTTGGGCGTTCTTAATCTGGCAATTGTCATCCCCCAGATGTTTGTGTCTGTGGTGAGTGGACCATGGGACGCAGCGTTCGGTGGTGGTAACCTACCGGCGTTTGTGGTGGGCGCCATTGCCGCTGCAATCAGCGGTATATTATCGATAGTTTTGTTGCCGTCTCCACCACCGGACTTGGCAAAGACGATTAACACATCTGGAGGCTTCCATTAG 1662 0.5409 MQIGSSLVYKFFSSLLQNTSNRTTLVITTCFVLSLSLMATKQTDLVKPSSLQVEPSASPPESSPFRKIVVVASIAAGIQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAVGAFAVAIAVFLIGYAADMGHMFGDSLEKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANSFFSFFMAVGNVLGYAAGSYSKLHNMFPFTKTKACDVYCANLKSCFFLSIALLLVLSIAALTYVKEKALEKATGGNEAENDSVGEGSGGFQCFGQMFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGRAYDKGVRAGALGLMLNSVVLGVVSLGMEVLARGVGGVKRLWGIVNFILAICLALTVLITKLAEHSRQFAPGSTDPLPPSTGVKAGALTLFAVLGIPLAITYSIPFALASIFSSSSGAGQGLSLGVLNLAIVIPQMFVSVVSGPWDAAFGGGNLPAFVVGAIAAAISGILSIVLLPSPPPDLAKTINTSGGFH 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2530 553 SUPERFAMILY MFS general substrate transporter 67 540 IPR036259 -
Lele05g2530 553 Gene3D MFS general substrate transporter like domains 63 541 IPR036259 -
Lele05g2530 553 CDD MFS_SLC45_SUC 68 530 - -
Lele05g2530 553 TIGRFAM GPH_sucrose: sucrose/H+ symporter 64 540 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lele05g2530 553 PANTHER SUGAR TRANSPORTER 64 534 - -
Lele05g2530 553 FunFam Sucrose transport protein 62 535 - -
Lele05g2530 553 Pfam MFS/sugar transport protein 77 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2530 Lele-ChrLele05 41074759 41077180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2530 38 553 Sucrose Transporter Gene Family AT1G71890 66.603 0.0 699
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2530 05 41074759 41077180 Lele07g2543 07 30837670 30839948 hybridization
Lele05g2530 05 41074759 41077180 Lele08g2446 08 30196573 30198984 hybridization