Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2520 ATGCGATTACTATATCGTGCGTTGTCGAAGAGAATGGAGGAATTGAGGAGGCAGAGGAGAATGGATAGGCCAAAGAGGCAGAGGCACCATCGTCTTCTTCTGAAAGTTGTGATTAAAATAATCAGGCGAAACATGAAAGAGTATCACTGGAATTTCCAAAAAATTATCATGATTGTGAAAGAAATGGAAAAGTCAGATGCAGTTTCGGACTTGGAGTGGATTCGTCAACATCTTCTTGCTGAGTTTCCGTCCTCAGAATCCTTCTTATCCAATCTGTATCCTGTAAAGCTCGAGGATTCTTCGTCGGAGTTTGATCTGAGTCCGCGAGTTCCGGTGCAAAGTTTCTGTTCTTCTGGTGAAACTTTTGGTTTTGAAGATGTGGAGGTTTTGATGAACTCCGTGTCGGAGGTCGAAATGGAGAAGAAGAAGCCCACGTCATCGGCTGAGACTGATGAGAAGGCCGACGAGTGCGATGAGACGGTTATGATGAGGCGGTACAGGGGCGTTCGGAGGAGGCCGTGGGGCAGATTTGCGGCGGAGATCCGTGACCCGACCCGGAAAGGGACACGGGTTTGGCTTGGTACGTTTGATAGTGAGATCGATGCCGCTAAGGCTTATGACCGTGCTGCGTTCAGAATGAGGGGTCGCAGGGCGATATTGAACTTTCCTCTTCAGGCCGGTGAATCTGATCCTACGCCGAACCGGTGTGGCCGGAAAAGGAGAAGACAAAGTTCACCGGAGGTGGAGGAGTTGTTCCAAATTTCCACTAAGATTTAA 777 0.4865 MRLLYRALSKRMEELRRQRRMDRPKRQRHHRLLLKVVIKIIRRNMKEYHWNFQKIIMIVKEMEKSDAVSDLEWIRQHLLAEFPSSESFLSNLYPVKLEDSSSEFDLSPRVPVQSFCSSGETFGFEDVEVLMNSVSEVEMEKKKPTSSAETDEKADECDETVMMRRYRGVRRRPWGRFAAEIRDPTRKGTRVWLGTFDSEIDAAKAYDRAAFRMRGRRAILNFPLQAGESDPTPNRCGRKRRRQSSPEVEELFQISTKI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2520 258 Gene3D AP2/ERF domain 164 225 IPR036955 GO:0003700|GO:0006355
Lele05g2520 258 ProSiteProfiles AP2/ERF domain profile. 165 223 IPR001471 GO:0003700|GO:0006355
Lele05g2520 258 CDD AP2 173 223 IPR001471 GO:0003700|GO:0006355
Lele05g2520 258 PANTHER DNA-BINDING DOMAIN 138 235 IPR044808 GO:0003700|GO:0009873
Lele05g2520 258 MobiDBLite consensus disorder prediction 224 258 - -
Lele05g2520 258 SMART rav1_2 165 229 IPR001471 GO:0003700|GO:0006355
Lele05g2520 258 MobiDBLite consensus disorder prediction 233 247 - -
Lele05g2520 258 Pfam AP2 domain 165 215 IPR001471 GO:0003700|GO:0006355
Lele05g2520 258 PRINTS Ethylene responsive element binding protein signature 205 225 IPR001471 GO:0003700|GO:0006355
Lele05g2520 258 PRINTS Ethylene responsive element binding protein signature 166 177 IPR001471 GO:0003700|GO:0006355
Lele05g2520 258 FunFam Ethylene-responsive transcription factor 2 164 225 - -
Lele05g2520 258 SUPERFAMILY DNA-binding domain 165 224 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2520 Lele-ChrLele05 40972702 40974839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2520 69 242 AP2-EREBP Transcription Factor Family AT5G07580 46.111 9.49e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g2520 AP2 2.1e-14 CL0081