Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2481 ATGCGGATGAGCTGTAATGGATGCCGCGTTTTGAGAAAAGGTTGCAGTGAGAATTGCAGTATAAAGCCGTGTTTGCAGTGGATTAAAAGCCCTGAGTCTCAGGCAAATGCTACTGTGTTTCTCGCCAAGTTCTACGGCCGAGCTGGGCTCATGAACCTTATCAACGCCGGTCCTGAACACCTTCGTCCTGCGATTTTTCGGTCTTTGCTATATGAGGCGTGCGGGCGGATAGTTAACCCGATTTATGGATCCGTCGGTTTGTTATGGTCCGGGAGTTGGCAGCTCTGTCAGGCCGCCGTGGAAGCCGTCTTAAAGGGCGCTCCGATCACGTCGATCACCTCCGAGGCGGCCACCAACGGGAGGGGCCCACCTCTCAAGGCTTACGACATACGTCACGTGTCCAAGGACGAGAACTTGGCCACGTCAAACGATGCTCAACGAGTCGTCAAGACTCGCACGAGGTTCAAGCGCTCCGTCGGCGGTGGCGTCAAGCCGAAATCTGACCACCACAAACCAGCGACCGGCTCGTTATCCGTTGAGCCCGCTCCAGAAGTTAACGGTCCAATCAACTCCTGGACCGGATGTTGTCCTGCTAAACCGGTTGTGAACCGGTCGGGGAGTCACGAGTCATCGCTGAGCCACCAATCGGAGGCGGTGAACGAGACCAAAGAGCGAGAGAGCGAGAGCATGATCTCCGAGGAGACCGCCGAGACTTCGATCCTCTTCCGAGATGAACCGGAATCCACCGGGAAGGCCAGTGAGCGAACCGTCGATGAAACAACCGAGATAGGCCTAGAGTTGACACTAGGGTTCGAACCAGCATCCCGTGCAAACCACGTGGTACCAGTGAAGAAGAGGAAGATCGAATTCCAGAATAGTGAAAACTGTTCATCCTGCGCAATGGACCTTGGAATTGAGTTCTCGGGCTGA 930 0.5505 MRMSCNGCRVLRKGCSENCSIKPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITSITSEAATNGRGPPLKAYDIRHVSKDENLATSNDAQRVVKTRTRFKRSVGGGVKPKSDHHKPATGSLSVEPAPEVNGPINSWTGCCPAKPVVNRSGSHESSLSHQSEAVNETKERESESMISEETAETSILFRDEPESTGKASERTVDETTEIGLELTLGFEPASRANHVVPVKKRKIEFQNSENCSSCAMDLGIEFSG 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2481 309 MobiDBLite consensus disorder prediction 152 185 - -
Lele05g2481 309 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Lele05g2481 309 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Lele05g2481 309 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 269 - -
Lele05g2481 309 PIRSF AS2 1 308 IPR017414 -
Lele05g2481 309 MobiDBLite consensus disorder prediction 203 236 - -
Lele05g2481 309 MobiDBLite consensus disorder prediction 218 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2481 Lele-ChrLele05 40596287 40597335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2481 1 303 AS2 family AT3G02550 55.016 5.96e-105 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele05g2481 LOB 1.3e-24 No_clan