Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2475 ATGGCTACTTGCAACAAGAAGAAGGTTGTGTTCATCATGGGATCAACGGGAACAGGAAAAACCAAGCTTTCAATCGACCTAGGCTCACATTTCCCTTCTGAAATCATCAACGCCGACAAGATCCAAGTGTACAAAGGTCTGGACATCATTACCAACAAGATCCCAGAATCTCAGCAACAAGGAATCCCCCACCACCTCCTCGGAATCCTTGAAGATCCCGAATTCGACTTCACTCCCACCCATTTCTGTGAGCATGTCATCTCTGCGATCGAACATATAATTGGACAAGGACACCTCCCCGTCATTGTCGGAGGCTCCAACACTTACCTTGAATGCCTTGTCGAAGATCCCTCCTTGGACTTTCATTCCAAATATGATTGTTGCTTCCTCTGGCTTGATGTGTCTCTTGATGTCCTCTTCCCTTATCTGGATAAAAGGGTTGATGAAATGGCGGACGCCGGGTTCGTGGATGAGACCAGAGAGTACTTTGTACCTGGCGCTGATTATTCTGCTGGAATCCGAAGAGCCATTGGTGCTCCTGAACTGGACGAGTATTTTAAGGTTGAGAACGATGTTACTGTGGACGATGATACGAAACAAGAGTTGCTGAAAGACGCTATCCAGAGAATGAAGGAGAATACTCGTACGCTGGCTCAAGCGCAGCTTTCAAAGATACATCGCCTCAATAATGAGCTTGATTGGGGATTGAATCGTATTGATGCAACTAAGGTATTTGAAGCTGTTCTGAATGGAAGTGCGTATCAGTGTCTGTGGCAAGATATGGTTTTTAATCCCAGCAAGGAGATTGTTCAGAGCTTCCTTGAAGGCTACAACAATATGAATGAGGGGCAGTTACCGAATAATTATTATTTTGGCGAATTTATACAGGGCTGA 894 0.4519 MATCNKKKVVFIMGSTGTGKTKLSIDLGSHFPSEIINADKIQVYKGLDIITNKIPESQQQGIPHHLLGILEDPEFDFTPTHFCEHVISAIEHIIGQGHLPVIVGGSNTYLECLVEDPSLDFHSKYDCCFLWLDVSLDVLFPYLDKRVDEMADAGFVDETREYFVPGADYSAGIRRAIGAPELDEYFKVENDVTVDDDTKQELLKDAIQRMKENTRTLAQAQLSKIHRLNNELDWGLNRIDATKVFEAVLNGSAYQCLWQDMVFNPSKEIVQSFLEGYNNMNEGQLPNNYYFGEFIQG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2475 297 Gene3D - 6 274 IPR027417 -
Lele05g2475 297 Pfam IPP transferase 123 223 - -
Lele05g2475 297 Pfam IPP transferase 42 116 - -
Lele05g2475 297 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 136 236 - -
Lele05g2475 297 FunFam Adenylate isopentenyltransferase 5, chloroplastic 136 236 - -
Lele05g2475 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 201 IPR027417 -
Lele05g2475 297 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 6 274 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2475 Lele-ChrLele05 40501665 40502558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2475 123 275 C2H2 Transcription Factor Family AT2G27760 33.708 8.20e-22 93.2