Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2474 ATGGCTACTTGCAACAAGAAGGTTGTGTTCATCATGGGATCAACGGGAACAGGAAAAACCAAGCTTTCAATCGACCTAGGCTCACATTTCCCTTCTGAAATCATCAACGCCGACAAGATCCAAGTGTACAAAGGTCTGGACATCATTACCAACAAGATCCCAGAATCTCAGCAACAAGGAATCCCCCACCACCTCCTCGGAATCCTTGAAGATCCCGAATTCGACTTCACTCCCACCCATTTCTGTGAGCATGTCATCTCTGCGATCGAACATATAATTGGACAAGGACACCTCCCCATCATTGTCGGAGGCTCCAACACTTACCTTGAATGCCTTGTCGAAGATCCCTCCTTGGACTTTCGTTCCAAATATGATTGTTGCTTCCTCTGGCTTGATGTGTCTCTTGATGTCCTCTTCCCTTATCTGGATAAAAGGGTTGATGAAATGGCGGACGCCGGGTTCGTGGATGAGACCAGAGAGTACTTCGTACCTGGCGCTGATTATTCTGCTGGAATCAGAAGAGCCATTGGTGCTCCTGAACTGGACGAGTATTTTAAGGTTGAGAACGATGTTAGTGTCGACGATGATACGAAACAAGAGTTGCTGAAAGACGCTATCCAAAGAATGAAAGAGAATACTCGTAAGCTGGCTCAAGCGCAACTTTCAAAGATACATCGCCTCAATAATGAGCTTGATTGGGGATTGAATCGTATTGATGCAACTAAGGTATTTGAGGCTGTTCTGAATAGAAGTGCGTATCAGTGTCTGTGGCAAGAAATGGTTTTTAATCCCAGCAAGGAGATTGTTCAGAGCTTACTTGAAGGCTAG 828 0.4541 MATCNKKVVFIMGSTGTGKTKLSIDLGSHFPSEIINADKIQVYKGLDIITNKIPESQQQGIPHHLLGILEDPEFDFTPTHFCEHVISAIEHIIGQGHLPIIVGGSNTYLECLVEDPSLDFRSKYDCCFLWLDVSLDVLFPYLDKRVDEMADAGFVDETREYFVPGADYSAGIRRAIGAPELDEYFKVENDVSVDDDTKQELLKDAIQRMKENTRKLAQAQLSKIHRLNNELDWGLNRIDATKVFEAVLNRSAYQCLWQEMVFNPSKEIVQSLLEG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2474 275 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 6 272 IPR039657 -
Lele05g2474 275 Pfam IPP transferase 41 115 - -
Lele05g2474 275 Pfam IPP transferase 121 222 - -
Lele05g2474 275 Coils Coil 202 230 - -
Lele05g2474 275 Gene3D - 6 273 IPR027417 -
Lele05g2474 275 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 135 235 - -
Lele05g2474 275 FunFam Adenylate isopentenyltransferase 5, chloroplastic 135 235 - -
Lele05g2474 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 195 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2474 Lele-ChrLele05 40498146 40498973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2474 122 274 C2H2 Transcription Factor Family AT2G27760 32.584 1.46e-21 92.0