Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2450 ATGGTTGATATTGCAAAGGCTTTGGCAAGGCCAGCTTCTTACACAACCAAGTATTTTGGTTGTGAGCTTGGAGCTCAATCCAAATTTGACGAGAAAACCGGGACATCTCATGTTAATGGGGCACATGATACTGCAAAACTTGCTGGACTTCTGGAGAACTTCATTAAGAAATATGTTCAGTGTTATGGTTGCGGGAATCCTGAAACTGAGATCCTGATCACCAAGAGTCAAATGATCCAGCTGAAATGTGCTGCTTGTGGGTTTGTGTCAGACGTGGATATGAGAGACAAGCTGACCACCTTTATAATCAAGAATCCTCCTGAACCCAAGAAAGGGTCGAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTAAAAGAAGGCGAAGCGGCTGATGAGGAAATGAAAAAATTGAAAAAGGAGGGTAAGAAGAAGGGTTCTTCCACTTCCAAGGATGGAACTACAAAATCAAAAAAGAAATCCAATAGCTCGGATGAAGACCGGGCATCACCCACTCATGGTAAGATTCATGAGAAGCCTCGTGTTGAAGAGGAGGAGGAAGATGATGGTGGTGATGTCCAATGGCAAACAGATACATCGCTGGAGGCTGCTCGCCAACGTATCCAGGAACAGTTAAGTGCTGTGACGGCTGATATGGTAATGCTTTCCACAGATGAGCCTGAGAAGAAGGCAAAAGCAGCTAATAAGGTTAATGTTGGGTCTGAGAATGGGAACTCAATGCCCTACAGGTCTCTTGTTGAGGAAGTCAAATCTAATTTGGAGAAAGGTGTATCTGCAAAGGAACTGCAGCACCATTTAGCAGCCATTACTGCATCTTCGCAGGAAAAAATGAGTGCTTTGTATGGGGCCCTTGTTGACGGTGTTGAGAAAGGATTCGCCAAGGAACTTGTCAAGAAGCGGAACTACCTTGCCGCTGCTCTTGCTGGGGAAGAAGGATCGCAGATGCTATTGCTCCATGCAATCGAGGTGTTCAGCAGCAAGAGCAGTTCCAATGCTCTGAAGGAGGTCGCTTTAGTGCTGAAGGCGCTCTATGATGCTGATGTGCTGGAGGAAGAGCACATAGTGCAATGGTATCAAAAAGGGCTCAAGGGAGATTCCAAGGACTCTAAGATCTGGAAGAATACTCAGCCATTCATTGAATGGCTTCAAAATGCAGAATCAGAATCAGAGGAAGAGTAA 1206 0.4552 MVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEILITKSQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEPKKGSKDKKAMRRAEKERLKEGEAADEEMKKLKKEGKKKGSSTSKDGTTKSKKKSNSSDEDRASPTHGKIHEKPRVEEEEEDDGGDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTDEPEKKAKAANKVNVGSENGNSMPYRSLVEEVKSNLEKGVSAKELQHHLAAITASSQEKMSALYGALVDGVEKGFAKELVKKRNYLAAALAGEEGSQMLLLHAIEVFSSKSSSNALKEVALVLKALYDADVLEEEHIVQWYQKGLKGDSKDSKIWKNTQPFIEWLQNAESESEEE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2450 401 SMART eIF2Bneu4 1 89 IPR002735 GO:0003743|GO:0006413
Lele05g2450 401 Gene3D - 65 105 - -
Lele05g2450 401 MobiDBLite consensus disorder prediction 229 248 - -
Lele05g2450 401 Gene3D - 247 401 - -
Lele05g2450 401 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 400 IPR045196 GO:0003743|GO:0006413
Lele05g2450 401 MobiDBLite consensus disorder prediction 108 186 - -
Lele05g2450 401 MobiDBLite consensus disorder prediction 103 195 - -
Lele05g2450 401 Gene3D - 1 64 - -
Lele05g2450 401 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 1 61 IPR016189 GO:0003743|GO:0006413
Lele05g2450 401 CDD W2_eIF5 253 399 - -
Lele05g2450 401 Pfam Domain found in IF2B/IF5 1 87 IPR002735 GO:0003743|GO:0006413
Lele05g2450 401 FunFam Eukaryotic translation initiation factor 5 65 105 - -
Lele05g2450 401 Pfam eIF4-gamma/eIF5/eIF2-epsilon 323 401 IPR003307 GO:0005515
Lele05g2450 401 SUPERFAMILY ARM repeat 251 395 IPR016024 -
Lele05g2450 401 SMART 542_3 309 397 IPR003307 GO:0005515
Lele05g2450 401 ProSiteProfiles W2 domain profile. 241 401 IPR003307 GO:0005515
Lele05g2450 401 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 58 93 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2450 Lele-ChrLele05 40178055 40179260 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2450 2 394 Eukaryotic Initiation Factors Gene Family AT1G77840 62.312 3.99e-154 441