Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2422 ATGGGAACAGCAAGAATCAGGAGAATTGTGTCACCATGTTGGAGATCATCGTCATCATCATGGCGTAAAGAGGATGATAATTCAAGTAATAAGAATGGGGATGCGAGTGGTCGAGTGGATGGGTTAATGTGGTACAAAGATTATGGGAAACATGTGAATGGAGAATTTTCAATGGCAGTGATTCAGGCAAATAATTTGTTGGAAGATCAAAGCCAGCTTGAATCTGGTTCCGTGAGTTCCTTTGAAGATGATGGCCCTCGAGGTACCTACGTTGGGATTTATGATGGCCATGGTGGTCCTGAAGCTTCTCGCTTTGTTAATGAACGACTCTTCAACAACATCAAAAGATTTACTTCAGATAAACGTGGGATGTCAGAGGAAGTGATAAAGAAAGCATTTTTGGAAACAGAAGATGAGTTTCTAAGCGTAGTGAGGGAGCAGTGGGAGAAGAAGCCATTGTTAGCATCAGTGGGAAGTTGCTGTTTGGTCGGAATAATCTGTGACGGTAAGGTGTACGTGGCTAATGCTGGAGACTCACGTGCTGTGTTAGGTCGACTCCATAATAATAAAGACATCAAAGCCATTCAGTTATCTTCTGAGCACAATGCAAGCATGGAATCCGTTAGAGACGAGTTACGTTCCTCTCACCCTCAAGATCCTCATGTCGTCGTCCTCAAGCATAGGGTCTGGCGTGTCAAGGGCATCATTCAGGTTTCGAGATCGATAGGAGACGCATATCTGAAGAGGGCAGAGTTTAACAGAGAACCACTGTTGGCGAAGTTTAGAGTATCAGAACCATTTGAGGAGCCAATCATGAAAGCAGAACCAACCATAAGTGTTCAAAAGCACCACGCTGATGATCAGTTCCTTATATTTGCATCAGATGGCCTGTGGGAACACTTGTCCAATAAAGAAGCTGTAGAAATCGTGTACAACTATCCCCGCAATGGAATAGCTCGGAGGCTGTTGAAAGCGGCTCTGTGTGAGGCGGCAAAGAAGAGAGAAATGAGATACTCAGATTTGAAAAAGATAGAGAGAGGAGTGAGGAGACACTTCCATGACGATATAACTGTTATTGTTTTGTATTTGGATTCTCATCTCATCAGTCGCTCCACTTGGCGTGGCCCTTGGCTTTCTCTCCGACGCGGTGGCCCTACCGTTGCCTCCACCCATCCTGAAAATTCTGATATTTAA 1194 0.4456 MGTARIRRIVSPCWRSSSSSWRKEDDNSSNKNGDASGRVDGLMWYKDYGKHVNGEFSMAVIQANNLLEDQSQLESGSVSSFEDDGPRGTYVGIYDGHGGPEASRFVNERLFNNIKRFTSDKRGMSEEVIKKAFLETEDEFLSVVREQWEKKPLLASVGSCCLVGIICDGKVYVANAGDSRAVLGRLHNNKDIKAIQLSSEHNASMESVRDELRSSHPQDPHVVVLKHRVWRVKGIIQVSRSIGDAYLKRAEFNREPLLAKFRVSEPFEEPIMKAEPTISVQKHHADDQFLIFASDGLWEHLSNKEAVEIVYNYPRNGIARRLLKAALCEAAKKREMRYSDLKKIERGVRRHFHDDITVIVLYLDSHLISRSTWRGPWLSLRRGGPTVASTHPENSDI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2422 397 SMART PP2C_4 49 361 IPR001932 -
Lele05g2422 397 Gene3D - 43 372 IPR036457 -
Lele05g2422 397 Pfam Protein phosphatase 2C 85 324 IPR001932 -
Lele05g2422 397 ProSiteProfiles PPM-type phosphatase domain profile. 77 363 IPR001932 -
Lele05g2422 397 PANTHER PROTEIN PHOSPHATASE 27 361 - -
Lele05g2422 397 FunFam Phosphatase 2C family protein 44 373 - -
Lele05g2422 397 CDD PP2Cc 56 363 IPR001932 -
Lele05g2422 397 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169
Lele05g2422 397 SUPERFAMILY PP2C-like 81 364 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2422 Lele-ChrLele05 39929104 39932918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2422 1 384 PP2C-type Phosphatase Gene Family AT3G12620 70.909 0.0 558