LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele05g2414	ATGGAACCATCGTGCATCATAGGAGCCGAGTTGCCTACCCTCCGGGAACTCTTCCAGCTTGAAGATGACGCACAGAGGGAAGCCACCGGCGACGAAAGTATCACGACGGAGTACCACACACCTTACAGGACTGATTCCGGTATCGAGCCACCTTGTTCGTCGTCTTTCGTGCTCACATTCAATAATCTCACCTACAGTGTGAAGGTCCGCCAGAAAATGAACTTCTCAACATTGTTCTCGCGACAAAGGAATAACCGTCTCGGAGCACCAGAAACTAAGATTCTTTTGAATGATATCTCCGGCGAGGCTCGCGACGGCGAGGTTCTTGCCGTTATGGGAGCTAGTGGTTCGGGGAAATCCACTCTGATTGACGCCTTGGCCAACCGAATAGCTAAAGGGAGCTTGAAAGGGAGCGTGAGATTGAACGGCGAGGCCATAGAATCGCGGCTTCTGAAAGCAATTTCAGCTTATGTAATGCAAGACGACCTTCTCTTTCCGATGCTCACGGTGGAAGAAACTCTGATGTTTGCAGCTGAATTCCGGTTACCTCACAGTCTCTCTAGATCCAAGAAGAAGATTCGAGTACAAGCTTTGATCGACCAGCTCGACCTCAGAAACGCCGCCAAAACCGTCATCGGCGATGAAGGCCACCGTGGTGTGTCCGGTGGCGAACGACGCCGTGTTTCCATCGGCATTGATATAATCCACGACCCGATCATATTGTTCCTCGATGAACCTACATCAGGACTGGATTCCACGAGCGCATTCACGGTGGTGAAGATCTTGCAGATAATCGCACACACCGGAAGCATCGTTGTCATGGCCATCCACCAACCGAGTTTGCGAATTCTTGGTCTTATCGACAGCATGATCTTCTTATCTCGCGGAGAAATCGTGTTCAGTGGTTCGCCTTTGCAGCTTCCCCTGTTCTTCGCTGAATTTGAACAGCCGATTCCAGAAAATGAGAACCAAACCGAGTTCGCATTGGACCTGATTCACGAGCTTGAAGGGTCATCTAGTGGAACTCAGAGATTGGTGGAGTTTAACAAGTCGTGGCAGATGAAGAAGCAGCCGGGAAGTAGCAATAATAGCACAGAAGTTGAATATCATCACCATGAATTATCATTGAAAGAAGCGATCAGCAGAAGCATCTCAAAGGGAAAACTAATGTCAGGAATCATAAAAACTACTGACAACAACACAAGATCATCATCAACAACAACTTCAAAGGTACCAACATTTGCAAACCCATTACTGATCGAAGTGGCAAAGCTCTCAATAAGATCATACAGCAATTCAAGAAGAATGCCTGAAATATTCCGAACTCGATTGGCCATAGTTCTGATCACCGGTTCACTCCTAGCTTCAGTGTTTTGGCGTTTAGATGATTCTCCAAAAGGGGTTCAAGAAAGGCTTAGCTTCTTCGCTTTCGCCATGTCCTCAACCTTTTACACAACAGCAGAAGCACTTCCATTGTTCCTTCAAGATCGTTACATTTTCATGAGAGAAACTGCTTACAACACTTATCGTAGATCCTCCTATATAGTTTCTCACGCTCTTGTATCTTTACCTTCGTTACTTGTCCTCTCATTAGCTTTTGCAGCGACCACGTTTTGGGCAGTTGGGCTTGAGGGAGGATGGTTCGGTTTCTTGTTCTATTTCATCTTCATATTTGCTTCATTCTGGGCAGGTAACTCCTTTGTCACCTTCCTCTCAGGTGTTCTACCTCACGTGATGCTGGGCTACACCATAGTAGTGAAGGCCTTAGCATATTTCTTACTATTCAGCGGATTCTTCATTAACAGAGACAGAATTCCAGTTTATTGGATTTGGTTTCACTACTTATCTCTGGTGAAATACCCATATGAAGCTGTAATGCAAAACGAGTTTGATGACTCAGTGAGTTGCTTTGTGAACGGAGTGCAAGTTTTCGATAACACGCCACTCGGGGAGTTGCCGAGTTCCATGAAACTGAAGCTGTTACAGAGCTTGAGTGAGACATTAGGGACGAATATAACGAGCTCAACGTGCTTGACAAGAGGGAGAGATATATTGCAGCAGAATGGGATAACACAGTTAAGCAAGTGGAACTGTTTGTGGGTAACAGTGGGTTGGGGATTTTTGTTTAGGGTTCTGTTTTATTTTGCTTTGTTGAAAGGGAGTAAGAATAAGAGGAAGTAA	2181	0.458	MEPSCIIGAELPTLRELFQLEDDAQREATGDESITTEYHTPYRTDSGIEPPCSSSFVLTFNNLTYSVKVRQKMNFSTLFSRQRNNRLGAPETKILLNDISGEARDGEVLAVMGASGSGKSTLIDALANRIAKGSLKGSVRLNGEAIESRLLKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPHSLSRSKKKIRVQALIDQLDLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFTVVKILQIIAHTGSIVVMAIHQPSLRILGLIDSMIFLSRGEIVFSGSPLQLPLFFAEFEQPIPENENQTEFALDLIHELEGSSSGTQRLVEFNKSWQMKKQPGSSNNSTEVEYHHHELSLKEAISRSISKGKLMSGIIKTTDNNTRSSSTTTSKVPTFANPLLIEVAKLSIRSYSNSRRMPEIFRTRLAIVLITGSLLASVFWRLDDSPKGVQERLSFFAFAMSSTFYTTAEALPLFLQDRYIFMRETAYNTYRRSSYIVSHALVSLPSLLVLSLAFAATTFWAVGLEGGWFGFLFYFIFIFASFWAGNSFVTFLSGVLPHVMLGYTIVVKALAYFLLFSGFFINRDRIPVYWIWFHYLSLVKYPYEAVMQNEFDDSVSCFVNGVQVFDNTPLGELPSSMKLKLLQSLSETLGTNITSSTCLTRGRDILQQNGITQLSKWNCLWVTVGWGFLFRVLFYFALLKGSKNKRK	726

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele05g2414	726	MobiDBLite	consensus disorder prediction	24	45	-	-
	Lele05g2414	726	ProSitePatterns	ABC transporters family signature.	220	234	IPR017871	GO:0005524\|GO:0016887
	Lele05g2414	726	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	92	307	IPR027417	-
	Lele05g2414	726	FunFam	ABC transporter G family member 6	85	311	-	-
	Lele05g2414	726	SMART	AAA_5	105	297	IPR003593	-
	Lele05g2414	726	PANTHER	ABC TRANSPORTER G FAMILY MEMBER 28	40	712	-	-
	Lele05g2414	726	Pfam	ABC transporter	96	248	IPR003439	GO:0005524
	Lele05g2414	726	Pfam	ABC-2 type transporter	425	630	IPR013525	GO:0016020\|GO:0140359
	Lele05g2414	726	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	73	320	IPR003439	GO:0005524
	Lele05g2414	726	CDD	ABCG_EPDR	57	302	-	-
	Lele05g2414	726	Gene3D	-	83	309	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele05g2414	Lele-ChrLele05	39881753	39885286	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele05g2414	90	297	Calmodulin-binding Proteins	AT2G36910	28.000	1.07e-11	66.6