LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele05g2412	ATGGGTTCTTCCGGTTGCAACTATAAATCTTTTATTGGAGTTTCATCCATTTTCTGGTTGATCTGGGTTTCATTAGGAGGTGTTTCTGGTGATGACTTTCTCATAGACTGTGGATCCCCTAACATCACTACACTGGGAAAACGTGTATTTCTAGCTGATAATTCTACTTCTGGGTTTCTTTCAACCTCAAAAAATATTTTGGCAAGGGCAGATTCCACCACTGGTCTTCTACTATCTTTTGATTCAAACCTGTACCATACTGCTAGAATCCTTGAGGGAATTTCTAAATACACATTTCCTATCAAAAACCGTGGTAGGTACTGGATTCGCTTGTACTTCTTCCCTTTTAGTTTTGGAAACTACAACATGAGCTCTGCAAAATTCTCTGTTTCTGCTCAAGAAAGAATAATCCTGCTCAAAGATTTTCAGTTAGATAGTGGTTTTGTACGGAGGGAATACTCTTTGAACATCTCTGAGAGCCAGCTTGTTCTCACTTTCACACCTTCTTCTAAGTCATTTGCATTCGTAAATGCCTTAGAAGTTATCTCAATTCCTGATAATGTTATTCCTGAGCATGTCAAGAGTGTTCACCCACAAGGTGATGATAAGAATCTATGGAAGCAGGCTCTCGAAACTGTTCATAGAGTGGACATGGGAAATCAATCCGTGTCACCTCTAAATGATAGCTTGGGGCGTAATTGGGTACCAGATGGTTCGTTTCTTCACGCGAATTTCGCCAATTTCACATCCAACATTACAGCAGTGAATTTCAAAGCAGCAAACATGTCAGATGTTATTGCACCAGCTGAGGTATATGGTACTTTGACTACGTTGAATGTTGTTGATCTAGATCCCAGATCCAGAGCAAATATCACATGGGTTTTTAATGTTGATCCTGGTTTTGATTATCTGCTTCGGTTTCACTTCTGTAACATCGTGAATCTACCACCAGAGACTCTCTTTAATGTTTATGTTAACTCATGGTTTGTTTCTACTATCAATGTTGGCACGGCAATGCCACATCAAGGAGCCCCATATTATACAGATGCAATCACAAAAGTAAGTGGTAGCTCTAGTTTACATGTAACTGTTGGTGTACCTAATCTAGGTGATAATGTTTCTCCAGTCTTTCTCAATGGGCTTGAGATCATGAAAATGAGCAATTCAAAAGACAGCCTGGTCCTGGACTCTAAGAGCAGTTCCAAGAAAAAACTTGGTATTATAGTAGCAGGTTGTGTGGCTGGTTTGGTTGTGATTGTTTTAGCTGTGGCTATGGCCGTTGGGTTACTATACCGAAGAAGAAGAAACCGTCTCCATGTTGGTCATGAAAATGGGAAGGACCTTTCTGGTATGAGTGGGATGGATCATTCTAACATCTTTTCCAACTCGAAAATCGGGTATCGTTTCCCACTTGCAATCATCCAAGAGGCAACCAATAATTTCAGTGAAGATTTGGTCGTTGGTGTGGGAGGTTTTGGGAAGGTTTACAAAGGAGTGTTCAGAGATGAAACAAAGGTGGCTGTGAAGAGGGGATCATCTCAATCACAACAAGGTCTTGCAGAGTTCAGAACCGAAATTGAGATGCTATCTCAGTTTCGCCACCGGCATCTGGTATCATTGATCGGATACTGCCACGAGCAAGAAGAGAGAATCATCATATATGAATACATGGAAAATGGTACACTAAAGAACCATTTGTATGGATCAGATGATAAACCAAGCTTAAATTGGAGGCAGAGGTTAGAAGCATGCATAGGAGCAGCCAAAGGGCTTCACTATCTTCACACTGGCTCTACCAAGGCGATTATTCACCGTGATGTTAAATCAGCAAATATACTCCTGGATGAGAATTTCATGGCTAAGGTTGCTGATTTTGGTCTTTCAAAGACTGGACCCGAGATTGATAAGACACATGTCAGCACTGCGGTGAAAGGAAGCTTTGGATATCTTGATCCAGAATACTTAACAACACAGCAACTCACAGAGAAATCAGACGTTTACTCTTTTGGTGTGGTCATGTTTGAAGTCCTCTGTGGCAGACCTGTGATAGACCCATCACTGCCAAGGGAAGAGGTGAATCTGATTGAATGGGTGATGAAATGTCTGGAGAGAGAGAACTTGAAAGAAATCGTGGATGCTCGTCTCACGGATCAGATAGGGTCGGATTCGCTGCAAAAGTTTGTAGAGATTGCAGAAAAGTGCTTAGCTGAACATGGCACTAACAGGCCTACCATGGGAGATGTGTTGTGGAACTTGGAGTATGCCCTAAGACAAGAAGGCGTCGGTCGCGAACCGTCACAGATTCGTCAAATGAATCGCTCGGATACCAGTTTGTCAGGTACCGAATACACCATGGGAAGCATGGGTGGCATCTCTGATGTTTCCATGAGCAAGATGTTTGCTCAAATGGTGAGAAGAGAGGATATGAGGTAG	2433	0.4205	MGSSGCNYKSFIGVSSIFWLIWVSLGGVSGDDFLIDCGSPNITTLGKRVFLADNSTSGFLSTSKNILARADSTTGLLLSFDSNLYHTARILEGISKYTFPIKNRGRYWIRLYFFPFSFGNYNMSSAKFSVSAQERIILLKDFQLDSGFVRREYSLNISESQLVLTFTPSSKSFAFVNALEVISIPDNVIPEHVKSVHPQGDDKNLWKQALETVHRVDMGNQSVSPLNDSLGRNWVPDGSFLHANFANFTSNITAVNFKAANMSDVIAPAEVYGTLTTLNVVDLDPRSRANITWVFNVDPGFDYLLRFHFCNIVNLPPETLFNVYVNSWFVSTINVGTAMPHQGAPYYTDAITKVSGSSSLHVTVGVPNLGDNVSPVFLNGLEIMKMSNSKDSLVLDSKSSSKKKLGIIVAGCVAGLVVIVLAVAMAVGLLYRRRRNRLHVGHENGKDLSGMSGMDHSNIFSNSKIGYRFPLAIIQEATNNFSEDLVVGVGGFGKVYKGVFRDETKVAVKRGSSQSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCHEQEERIIIYEYMENGTLKNHLYGSDDKPSLNWRQRLEACIGAAKGLHYLHTGSTKAIIHRDVKSANILLDENFMAKVADFGLSKTGPEIDKTHVSTAVKGSFGYLDPEYLTTQQLTEKSDVYSFGVVMFEVLCGRPVIDPSLPREEVNLIEWVMKCLERENLKEIVDARLTDQIGSDSLQKFVEIAEKCLAEHGTNRPTMGDVLWNLEYALRQEGVGREPSQIRQMNRSDTSLSGTEYTMGSMGGISDVSMSKMFAQMVRREDMR	810

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele05g2412	810	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	602	614	IPR008271	GO:0004672\|GO:0006468
	Lele05g2412	810	MobiDBLite	consensus disorder prediction	765	782	-	-
	Lele05g2412	810	Gene3D	Transferase(Phosphotransferase) domain 1	557	775	-	-
	Lele05g2412	810	Gene3D	-	33	184	-	-
	Lele05g2412	810	Gene3D	-	208	387	-	-
	Lele05g2412	810	PANTHER	OS07G0166700 PROTEIN	468	758	IPR045272	GO:0004714\|GO:0006468
	Lele05g2412	810	MobiDBLite	consensus disorder prediction	763	782	-	-
	Lele05g2412	810	ProSitePatterns	Protein kinases ATP-binding region signature.	487	509	IPR017441	GO:0005524
	Lele05g2412	810	SMART	serkin_6	481	755	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele05g2412	810	Pfam	Malectin-like domain	35	386	IPR024788	-
	Lele05g2412	810	FunFam	Receptor-like protein kinase FERONIA	557	774	-	-
	Lele05g2412	810	FunFam	receptor-like protein kinase FERONIA	447	556	-	-
	Lele05g2412	810	FunFam	Putative receptor-like protein kinase	32	185	-	-
	Lele05g2412	810	Gene3D	Phosphorylase Kinase; domain 1	447	556	-	-
	Lele05g2412	810	SUPERFAMILY	Protein kinase-like (PK-like)	455	753	IPR011009	-
	Lele05g2412	810	CDD	STKc_IRAK	496	753	-	-
	Lele05g2412	810	Pfam	Protein tyrosine and serine/threonine kinase	486	749	IPR001245	GO:0004672\|GO:0006468
	Lele05g2412	810	ProSiteProfiles	Protein kinase domain profile.	481	755	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele05g2412	Lele-ChrLele05	39864063	39866495	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele05g2412	8	807	Receptor kinase-like Gene Family	AT3G46290	52.153	0.0	787

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lele05g2412		Malectin_like	2.6e-28	CL0202

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele05g2412	05	39864063	39866495	Lele07g2434	07	29701811	29704237	hybridization
	Lele05g2412	05	39864063	39866495	Lele08g2330	08	29035843	29038275	hybridization