Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2403 ATGGGGAAGCCAAGAAGAACACAGATTCTTCTTCTCTGTTTCATGACACTTAATGTCTGGCTTTCTTCTTGTTCTTCTTCTGCAAATGCTTTTCTGTCTCCTAAAGGAGTGAACTTTGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTGGTTGATCCTCATGGAGTTTTAGATACTTGGGATGGAGATTCTGTTGATCCTTGTAGCTGGACCATGGTCACCTGTTCTTCTGACAACCTTGTCGTTAGTCTGGGCGCTCCTAGTCAAAGCTTATCTGGCACTTTGTCTCCCACCATAGGAAACCTCACAAACCTTCAGACTCTGTTGTTACAGAATAATAACATAACAGGTACAATTCCTTCAGAACTAGGGAAGCTATCAAAGCTGCAAACTTTGGATCTGTCAAATAACTTGTTCAATGGGGAAATTCCTGCTTCTTTAGGCCACATGAGCAAGCTGCAATACGTGAGGCTGAATAATAATAGTCTTTCTGGAGAATGTCCAGAGTCACTGGCCAACATGGCACAACTTGCTTTTCTTGATTTGTCCTACAACAATCTGAGTGGGCCTGTGCCCAGAATTCTGGCCAAATCATTCAGCATTGTTGGAAATCCTCTCATCTGTGGTACTGGGAAAGAAGAAACCTGCCATGGGATGTCACTGATGCCTATGTATATGAACTTAAACAATACCCAAGATTCTCAACCTTCTGGCAGACAAAAAACACACAAAGTGGCTATTGCCTTTGGTTTGAGCTTAGGATGTCTCTGTCTAATAGTTGTTTGTTTTGGACTATTTCTCTTGTGGAGGCATAAGCATCATCAACAAGCATTCTTTGATGTCAAAGATCGCCATCACGAGGAAGTGCATCTGGGGAATTTGAAGAGGTTTCATTTCAGAGAGCTGCAGATTGCTACAAACAATTTCAGCAACAAAAACATACTCGGAAAAGGCGGGTTCGGACACGTGTACAAGGGAGTTCTTCAAGATGGAACAGTGGTAGCAGTGAAGAGGCTTAGAGATGGGAATGCCATTGGAGGAGAAATACAGTTTCAGACTGAAGTTGAGATGATAAGCTTGGCAGTACACAGAAACCTCCTCAAACTCTATGGTTTCTGTATGACTCCCACTGAAAGGCTTCTGGTTTACCCTTTTATGCCTAATGGCAGTGTTGCTTCTCGCCTCAAAGCAAAACCAGTGTTGGACTGGGGAACAAGGAAGCAAATAGCATTAGGAGCGGCAAGGGGATTACTATACCTTCATGAGCAGTGTGATCCAAAGATAATTCACAGGGATGTGAAAGCTGCAAACATATTACTTGATGAGTACTATGAAGCAGTGGTTGGAGATTTTGGATTGGCAAAGCTTTTGGACCATCAAGATTCTCATGTGACCACGGCTGTGAGGGGTACTGTCGGCCACATTGCACCTGAATATCTCTCCACAGGGCAGTCCTCTGAAAAAACTGATGTCTTTGGATTTGGTATTCTTCTTCTTGAGTTGATCACTGGCCTTAGGGCTCTTGACTTTGGAAAAGCTTCCAATCAGAAAGGAGCCATGCTTGATTGGGTGAAGAAAATCCATCAAGAGAAGAAACTGGAACTGCTAGTGGACAAGGATTTGAAGAGCAACTATGACAGAATAGAGCTAGAAGAAATGGTAAAAGTGGCACTTCTGAGTACACAATATGTTCCAGGGCAGAGACCTAAAATGTCAGAAGTAGTGAGAATGCTTGAAGGAGATGGACTTGCAGAGAGATGGGAAGCTTCCCAACAACTAAGAGCTCATCATCATCATCATGAAACAAGCAAATCCAAACATAATGCCCATGAATTCTCTTCTTCAGATCGCTATTCTGATCTCACTGACGATTCTTCTTTGTTAGTTCAAGACATGGAGCTTTCCGGCCCAAGGTGA 1920 0.4292 MGKPRRTQILLLCFMTLNVWLSSCSSSANAFLSPKGVNFEVQALMGIKASLVDPHGVLDTWDGDSVDPCSWTMVTCSSDNLVVSLGAPSQSLSGTLSPTIGNLTNLQTLLLQNNNITGTIPSELGKLSKLQTLDLSNNLFNGEIPASLGHMSKLQYVRLNNNSLSGECPESLANMAQLAFLDLSYNNLSGPVPRILAKSFSIVGNPLICGTGKEETCHGMSLMPMYMNLNNTQDSQPSGRQKTHKVAIAFGLSLGCLCLIVVCFGLFLLWRHKHHQQAFFDVKDRHHEEVHLGNLKRFHFRELQIATNNFSNKNILGKGGFGHVYKGVLQDGTVVAVKRLRDGNAIGGEIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPFMPNGSVASRLKAKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALDFGKASNQKGAMLDWVKKIHQEKKLELLVDKDLKSNYDRIELEEMVKVALLSTQYVPGQRPKMSEVVRMLEGDGLAERWEASQQLRAHHHHHETSKSKHNAHEFSSSDRYSDLTDDSSLLVQDMELSGPR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2403 639 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Lele05g2403 639 SUPERFAMILY L domain-like 40 202 - -
Lele05g2403 639 FunFam Somatic embryogenesis receptor kinase 1 279 386 - -
Lele05g2403 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Lele05g2403 639 SMART serkin_6 310 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2403 639 Pfam Leucine Rich repeats (2 copies) 104 144 IPR025875 -
Lele05g2403 639 SUPERFAMILY Protein kinase-like (PK-like) 294 590 IPR011009 -
Lele05g2403 639 FunFam Putative LRR receptor-like serine/threonine-protein kinase 37 219 - -
Lele05g2403 639 Gene3D Ribonuclease Inhibitor 37 219 IPR032675 -
Lele05g2403 639 Gene3D Phosphorylase Kinase; domain 1 279 386 - -
Lele05g2403 639 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 590 - -
Lele05g2403 639 FunFam Somatic embryogenesis receptor-like kinase 1 387 599 - -
Lele05g2403 639 Pfam Protein kinase domain 311 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2403 639 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Lele05g2403 639 ProSiteProfiles Protein kinase domain profile. 310 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2403 639 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Lele05g2403 639 Gene3D Transferase(Phosphotransferase) domain 1 387 599 - -
Lele05g2403 639 MobiDBLite consensus disorder prediction 591 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2403 Lele-ChrLele05 39713119 39718132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2403 11 639 Receptor kinase-like Gene Family AT5G16000 74.408 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele05g2403 Pkinase 5.1e-43 CL0016