Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2370 ATGCCAAAGCATTGCCTGAGTAGGAGTACTAAGGCGAACCATACAGTTGTCAATTTCAGAATCGGGGGCTCCAGAAAATCTGATTGCTATGAAGGTGTTCTTGCGCCGATGCCCTGTGATAAGAGAGATCAAATTATGGTTCATGGAACTGATTTAGTTTCCTTTGGGATCTCTGCTGGTTTGGCTTGTGGAATATTGATAGTTTGTCTCATATGTTTGGTCATAAAGTCGTGTAAGAGGCGTGCTCATCTTAGACGTTGTGCAAATGAACGTAGTCTAACAACACTTCCTATACGTACAAATGGATTTGAAACAAGCACTGACTTCAGTGCTTCTCTTGCAAGCTCCATCGCTGCTCCAATGTCAGAAAATCTTCAGAAAGATTCCCATTTCTCTTGGTGGAAACGTTCAAAGAAAGATCAGTTTCTATCCTCATCAGGCATTCTTAGATACTCATTCAAAGAAATTCAGAAGGCAACACAAAATTTCACAACTATCTTGGGAGAAGGATCATTTGGCACAGTTCATAAAGCAACAATGCCTACTGGCCAGGTGGTAGCTGTAAAGGTGCTTGGTTCTGATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTACTTTTGCTAGGAAGACTGCATCATCGGAATCTTGTAAATTTGTTAGGATATTGTGTAGATAAAGGACAACGTATTTTGATTTATGAGTTCATGAGCAATGGAAGTCTAGAAAGGCTTATACATGGTGAAGAAAAGGTTTTAAGTTGGGATGAAAGGCTGCAAATTTCTGTTGATATTTCACATGGAATTGAATACCTTCATGAAGGAGCGGTCCCGCCCATTATACACCGTGATTTGAAATCTGCCAATATATTGTTAGATCACTTAATGCGAGCTAAGGTGGCTGATTTTGGGCTGTCAAAGGAGGAAGTCTTCGATGGGCGAAATTCTGGCTTGAAAGGCACATATGGCTACATAGACCCATCATACATTTCCACTAACAAGTTCACAATGAAAAGTGACATTTACAGTTTCGGTATCATCATTTTCGAGCTCATCACTTCCATTCATCCTCAGCAGAATTTGATGGAATACATTGACCTCGCTGCAATGGATCATGATGGTGTAGATGGAATACTTGACAAGAACCTGGTGGGAAAATGCAACATTGAAGAAGTGAGAAAGCTTGCTAAGGTTGGACACAAGTGCTTGCACAAATCACCCAGGAAACGTCCTTCAATTGGTGAGGTTTCACAGGCTTTATCCAGCATAAGACAGAGACGAAGCCTTTTGAAAGAAAACACCATGTCCTTTGCTGCCTCTAGCTTTTCCAGAGCTTTGAGCAGACTTGAGGATCAACAGGTTGAGTTAAGCAGGATAGCCACCATGGCCCACTAG 1395 0.4151 MPKHCLSRSTKANHTVVNFRIGGSRKSDCYEGVLAPMPCDKRDQIMVHGTDLVSFGISAGLACGILIVCLICLVIKSCKRRAHLRRCANERSLTTLPIRTNGFETSTDFSASLASSIAAPMSENLQKDSHFSWWKRSKKDQFLSSSGILRYSFKEIQKATQNFTTILGEGSFGTVHKATMPTGQVVAVKVLGSDSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCVDKGQRILIYEFMSNGSLERLIHGEEKVLSWDERLQISVDISHGIEYLHEGAVPPIIHRDLKSANILLDHLMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPSYISTNKFTMKSDIYSFGIIIFELITSIHPQQNLMEYIDLAAMDHDGVDGILDKNLVGKCNIEEVRKLAKVGHKCLHKSPRKRPSIGEVSQALSSIRQRRSLLKENTMSFAASSFSRALSRLEDQQVELSRIATMAH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2370 464 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 237 445 - -
Lele05g2370 464 FunFam S-receptor-like serine/threonine-protein kinase 132 236 - -
Lele05g2370 464 ProSitePatterns Protein kinases ATP-binding region signature. 167 189 IPR017441 GO:0005524
Lele05g2370 464 CDD STKc_IRAK 167 423 - -
Lele05g2370 464 Pfam Protein tyrosine and serine/threonine kinase 163 419 IPR001245 GO:0004672|GO:0006468
Lele05g2370 464 SUPERFAMILY Protein kinase-like (PK-like) 134 418 IPR011009 -
Lele05g2370 464 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 57 436 - -
Lele05g2370 464 SMART serkin_6 161 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2370 464 ProSiteProfiles Protein kinase domain profile. 161 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2370 464 Gene3D Transferase(Phosphotransferase) domain 1 237 444 - -
Lele05g2370 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Lele05g2370 464 Gene3D Phosphorylase Kinase; domain 1 125 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2370 Lele-ChrLele05 39304297 39309086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2370 144 420 Receptor kinase-like Gene Family AT3G19300 40.909 9.22e-69 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lele05g2370 PK_Tyr_Ser-Thr 8.1e-48 CL0016