Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2368 ATGTCTCTTCTTCACACAAAGGTGGATGAAGCGACTAGAGAACAGCGGGTCAACGCACATCGTTCTAAGCATTCAGAAACCGAGCAGCGTAGAAGGAGCAAGATAAATGAGAGATTTCAGATTCTGAGAGATCTCATTCCTCAAAATGATCAGAAAAGGGATAAGGCTTCTTTCTTGTTGGAGGTTATTGAGTATATTCAATTTCTACATGAGAAATTACAAATGTATGAGCAATCTTACCAAGGGTGGAATCAGGAGCCAATGAAATTAATTCCTTGGAGAAATCATCGTGGACCTACAGATAATGTCACATCTCAGGCTATACAAAATGGTTCTGGTCATGAGAACAATGATGTTGTCTCTCCGTCACTGCCCTTAAATGCACAGAATACAATTGAATCTGACTTGTCATCAACAATTATTCATAAGGCTGGCCCCCATGGTTTAGCTTCTGATCCAGTTCCTTTGGGTTTGCAAATGCGGTTGGACATGTTTGCGCCGACTGTGAGCAGTGGCATTCCAACCCAGCATTTACATGAAGCAGTATCTAACACTGAGAACATGCCTTCCCATACTCAGCCTCAGGTGTGTCTTGGCGAACCTAAGGAGTGTGCATATGATTTTCCAAATAATACATTGAAGGAACAGGACGAGCTGACATTTGAAAGTGAATCAGTTAGCATCTCAAGAGCCTATTCTCAAGGAATATTGGATACTTTTGTGCAATCATTGCGGTCTTCAGGTGTGGATTTATCCAAGGCCAATGTTTCAGTACAAATTGATGTAGGGAGACGATCAATGGCCTCCACATCTAGCTCAAAGGATCATGAGAACCAATTTGCGAACACCCCATCAGTGCCATGTTTAGGAGTGGACTACTACAGTGAGGATTCTGAACAAGCTCCTCTTAAGAGGCTCAGAACAGAAGAGAGTTAA 936 0.4231 MSLLHTKVDEATREQRVNAHRSKHSETEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQFLHEKLQMYEQSYQGWNQEPMKLIPWRNHRGPTDNVTSQAIQNGSGHENNDVVSPSLPLNAQNTIESDLSSTIIHKAGPHGLASDPVPLGLQMRLDMFAPTVSSGIPTQHLHEAVSNTENMPSHTQPQVCLGEPKECAYDFPNNTLKEQDELTFESESVSISRAYSQGILDTFVQSLRSSGVDLSKANVSVQIDVGRRSMASTSSSKDHENQFANTPSVPCLGVDYYSEDSEQAPLKRLRTEES 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2368 311 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 20 96 IPR036638 GO:0046983
Lele05g2368 311 Coils Coil 66 86 - -
Lele05g2368 311 SMART finulus 25 75 IPR011598 GO:0046983
Lele05g2368 311 MobiDBLite consensus disorder prediction 267 285 - -
Lele05g2368 311 MobiDBLite consensus disorder prediction 1 32 - -
Lele05g2368 311 CDD bHLH_AtBIM_like 18 94 - -
Lele05g2368 311 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 5 309 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lele05g2368 311 MobiDBLite consensus disorder prediction 7 32 - -
Lele05g2368 311 Gene3D - 17 90 IPR036638 GO:0046983
Lele05g2368 311 MobiDBLite consensus disorder prediction 267 286 - -
Lele05g2368 311 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 19 69 IPR011598 GO:0046983
Lele05g2368 311 Pfam Helix-loop-helix DNA-binding domain 21 69 IPR011598 GO:0046983
Lele05g2368 311 MobiDBLite consensus disorder prediction 101 124 - -
Lele05g2368 311 FunFam BHLH domain class transcription factor 17 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2368 Lele-ChrLele05 39279911 39284761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2368 16 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 38.689 1.82e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele05g2368 HLH 4e-15 No_clan