Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2357 ATGGCGGTGTCTGTGTCTTGTTTCTTCTTGTTTCAGTTGTTTATGGCCATTATCTCTTTCTCTGCCATGGCTTCTTTTGCCTTTGATGGAAGCTGGCATGATGCTCATGCAACCTTCTATGGTGACATGTCCGGAAGGGAAACCATGCAAGGAGCTTGTGGTTATGGAGACCTCTTCAAGCAAGGTTATGGCCTGGAAACGGCAGCACTAAGCACTGCTCTGTTCAACAATGGACTCACGTGCGGGGCATGCTTTGAGCTCGAGTGCGTCAACGACCCGCAATGGTGCATCTCTGGCGCCGGCACCATCAAGATCACCGCCACCAACTTCTGTCCACCCAACCACGATCCTCCAGACGTTAACCACTGGTGCAACCCTCCCCAGGAGCACTTCGACCTCTCCATGCCCATGTTTACGAAGCTCGCCCACTACAAAGCCGGCATCATCCCCGTCCGCTACCGCCGTGTCGCGTGCTCCAAGTCCGGCGGTGTCAAGTTCGAGCTCAAGGGCAACCCTTACTGGATAACCGCACTTTTCTTCAACGTCGGCAACGCCGGTGACATCACCGGAGCAAATATCAGAGGTGGTAAAGGCGGCGGGTGGATTCAGATGTCGAGGAATTGGGGTCAGGTCTGGCAAACGGGGACAAACTTAGTGGGACAAAACTTGTCGTTTATGGTTACCACAAGCGATGGGAAGACGTTGGAGTTTGATAATGTTGTGCCGTCGAATTGGCAGTTTGGTCAGACTTATGAGGGAAAGCAGAACTTTTAA 774 0.5258 MAVSVSCFFLFQLFMAIISFSAMASFAFDGSWHDAHATFYGDMSGRETMQGACGYGDLFKQGYGLETAALSTALFNNGLTCGACFELECVNDPQWCISGAGTIKITATNFCPPNHDPPDVNHWCNPPQEHFDLSMPMFTKLAHYKAGIIPVRYRRVACSKSGGVKFELKGNPYWITALFFNVGNAGDITGANIRGGKGGGWIQMSRNWGQVWQTGTNLVGQNLSFMVTTSDGKTLEFDNVVPSNWQFGQTYEGKQNF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2357 257 SUPERFAMILY Barwin-like endoglucanases 31 181 IPR036908 -
Lele05g2357 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 163 IPR007112 -
Lele05g2357 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 253 IPR007117 -
Lele05g2357 257 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Lele05g2357 257 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Lele05g2357 257 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Lele05g2357 257 PRINTS Expansin/Lol pI family signature 239 253 IPR007118 GO:0005576
Lele05g2357 257 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Lele05g2357 257 PRINTS Expansin/Lol pI family signature 201 215 IPR007118 GO:0005576
Lele05g2357 257 SUPERFAMILY PHL pollen allergen 160 253 IPR036749 -
Lele05g2357 257 Pfam Lytic transglycolase 67 153 IPR009009 -
Lele05g2357 257 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Lele05g2357 257 PRINTS Expansin signature 239 255 IPR002963 GO:0009664
Lele05g2357 257 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Lele05g2357 257 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Lele05g2357 257 PRINTS Expansin signature 210 231 IPR002963 GO:0009664
Lele05g2357 257 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Lele05g2357 257 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Lele05g2357 257 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Lele05g2357 257 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Lele05g2357 257 Gene3D - 162 257 IPR036749 -
Lele05g2357 257 SMART dpbb_1 67 153 IPR007112 -
Lele05g2357 257 PANTHER EXPANSIN-A15 11 255 IPR002963 GO:0009664
Lele05g2357 257 Pfam Expansin C-terminal domain 164 242 IPR007117 -
Lele05g2357 257 Gene3D - 17 159 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2357 Lele-ChrLele05 39141761 39143211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2357 28 257 Expansin Gene Family AT5G39280 65.652 2.24e-114 327